| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_28500 |
|---|
| Symbol | |
|---|
| ID | 8634484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 3183453 |
|---|
| End bp | 3185648 |
|---|
| Gene Length | 2196 bp |
|---|
| Protein Length | 731 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | phosphotransacetylase |
|---|
| Protein accession | YP_003315586 |
|---|
| Protein GI | 269796131 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.157422 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTCCA CCGCTCGCAG CATCTTCATC ACGTCCCCCG AGGGTGAGAC CGGCAAGTCC
ACCGTCGCCC TCGGGGTCCT CGACCTCCTC ACGCGCCGCG TGCAGCGTGT CGGTGTGTTC
CGTCCGGTCA CCCGGACGGG GCACACCGCC CGCGGCACGG CCGCCTCGGC CGAAGGGTCA
GAACGCGACT ACGTCGTCGA GCTGCTCCTG GCGCACGACG GCGTGGACCT CACGTACGAG
GACTGCGTCG GCGTCACCTA CGACGACCTG CACGCCGACC CCGAGGCCGC CCTCTCGCAG
ATCCTCACCA AGTACCACGA GGTCGAGAAG AAGTGCGACC TCGTGGTCAT CGTCGGCACC
GACTACACCG ACGTGACCGG CCCCACCGAG CTGGCCTTCA ACGCGCGGAT CGCCGCGAAC
CTCGGCGCCC CGGTGCTCCT GGTGCTCTCC GGCCGCGACC GCTCCCCCGC GGGCATCCGG
CAGATGAGCG AGGTGTCGGT CTCCGAGCTG CAGTCCAACC ACGCCCAGGT GATCGGCGTC
GTGGCGAACC GCTGCTTCCC CGACGACCTC GAGGCCATCC GTGCCGAGTT CGCCGGCGAC
GACCTCCCCG TGTGGACCAT GCCGGACGAC CCGTACCTCA TGGCGCCGAC CGTCAAGCAG
CTGATGGGCG CCGTCGGCGG CCGCCTGCTG CTCGGCGAGG AAGAGCTCCT CGGCCGCGAG
GTCCTCGACG TCCTCGTCGG CGCGATGAAC TTCGAGCACC TGCTCGACCG GCTGGCCGAC
GGTGCCGTGG TCATCACCCC GGGCGACCGG ACCGACGTCC TGCTCGGGCT GCTCACCGCG
CAGACCGCCA AGAACTTCCC GTCGCTCGCC GGCATCATCC TCAACGGCGG GTTCCTCCCG
CACGAGTCGG TGAGCCGGCT CATCGCCGAC CTCGCACCGA GCGTCCCGAT CATCCAGACG
GACCTCGGGA CCTTCCGGTC GGCGAGCGCC GCGGCCTCTG CCCGCGGGCG GGTCACCAAG
GACTCTCAGC GCAAGATCGA CACCGCCCTC GCGCTGTTCG AGCAGAACGT GGACTCCACC
TCGCTGCTCG CGAGCCTCGA CGTCGAGCGC ACCGGGGTCG TCACCCCGCT GATGTTCGAG
TACGAGCTCC TCAACCGGGC CCGCGCCGAC CGCAAGCACA TCGTCCTGCC CGAGGGCACC
GACGACCGGA TCCTGCGCGC GGCGTCCACG CTGCTGCAGC GCCAGGTGGC GCACCTGACG
CTCCTCGGCG ACGAGGAGTC GATCCGCGCC CGCGCCGTCG AGCTCGGCCT GGACATCTCC
GAGGCGAAGG TCCTCGACCC GCACTCCGGC GAGATGCACG AGGAGTTCGC GCAGGCCTAC
ACGACGATGC GCGCCCACAA GGGCATGACC GTCGACCGTG CGCGGGAGAT CGTCAGCTCG
GTGTCGTACT TCGGCACCAT GATGGTCCAG CTCGGGTACG CCGACGGCAT GGTCTCGGGA
GCGGCGCACA CCACCGCCCA CACGATCCGC CCGGCCTTCG AGATCATCAA GACGGTCCCG
AACACGTCGG TCGTCTCGTC GGTGTTCCTC ATGTGCCTCG AGGACCGCGT GCTCGTCTAC
GGCGACTGCG CCGTCAACCC GGACCCGACC GCAGAGCAGC TCGCGGACAT CGCGATCTCC
TCCGCGGCGA CGGCCGCCCA GTTCGGCGTG GAGCCGCGCA TCGCGATGCT CTCGTACTCG
ACCGGCGAGT CCGGCACCGG TGCCGACGTC GACAAGGTGC GGGCTGCCAC CGCCCTGGTC
CGCGAGCGCC GCCCCGACCT GTCCGTCGAG GGCCCCATCC AGTACGACGC GGCCGTCGAC
GCCTCGGTCG CCGCCTCGAA GATGCCCGAC TCGGCCGTCG CAGGCCGCGC GACGGTGTTC
GTGTTCCCCG ACCTCAACAC CGGGAACAAC ACGTACAAGG CCGTCCAGCG GTCCGCCGGT
GCGGTCGCCG TCGGACCCGT CCTGCAGGGT CTGCGCATGC CGGTCAACGA CCTGTCGCGC
GGCGCCCTCG TCCAGGACAT CGTCAACACC GTCGCCATCA CCGCCATCCA GGCGCAGGCG
CTCTCGGCCG AGAAGGCCCG CGTCGCCGGA GCGCACGCAG AGCCCGCGGC AGTCCCCGCC
GCAGGTACCC ACGGAGCAGG AGCACACACC GCATGA
|
|---|
| Protein sequence | MSSTARSIFI TSPEGETGKS TVALGVLDLL TRRVQRVGVF RPVTRTGHTA RGTAASAEGS
ERDYVVELLL AHDGVDLTYE DCVGVTYDDL HADPEAALSQ ILTKYHEVEK KCDLVVIVGT
DYTDVTGPTE LAFNARIAAN LGAPVLLVLS GRDRSPAGIR QMSEVSVSEL QSNHAQVIGV
VANRCFPDDL EAIRAEFAGD DLPVWTMPDD PYLMAPTVKQ LMGAVGGRLL LGEEELLGRE
VLDVLVGAMN FEHLLDRLAD GAVVITPGDR TDVLLGLLTA QTAKNFPSLA GIILNGGFLP
HESVSRLIAD LAPSVPIIQT DLGTFRSASA AASARGRVTK DSQRKIDTAL ALFEQNVDST
SLLASLDVER TGVVTPLMFE YELLNRARAD RKHIVLPEGT DDRILRAAST LLQRQVAHLT
LLGDEESIRA RAVELGLDIS EAKVLDPHSG EMHEEFAQAY TTMRAHKGMT VDRAREIVSS
VSYFGTMMVQ LGYADGMVSG AAHTTAHTIR PAFEIIKTVP NTSVVSSVFL MCLEDRVLVY
GDCAVNPDPT AEQLADIAIS SAATAAQFGV EPRIAMLSYS TGESGTGADV DKVRAATALV
RERRPDLSVE GPIQYDAAVD ASVAASKMPD SAVAGRATVF VFPDLNTGNN TYKAVQRSAG
AVAVGPVLQG LRMPVNDLSR GALVQDIVNT VAITAIQAQA LSAEKARVAG AHAEPAAVPA
AGTHGAGAHT A
|
|---|
| |