Gene Sked_28110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_28110 
Symbol 
ID8634445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3139777 
End bp3141435 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content73% 
IMG OID 
ProductIMP cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase 
Protein accessionYP_003315547 
Protein GI269796092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAG CACACCCGTC CGTCCCTGTC GCCCAGCTCG ACGACGACTC GCAGCGCCCC 
GTGCGCCGCG CCCTGGTCAG CGTCTACGAC AAGACGGGCC TCGCCGAGCT CGCCCAGGCG
CTGCACGCTG CCGGCGTCGA GATCGTCTCG ACCGGGTCGA CCGCCTCGAC CATCGCCGCC
GCGGGAGTGC CCGTCACCGG CGTCGAGGAG CTCACCGGGT TCCCCGAGTG CCTCGAGGGC
CGCGTCAAGA CGCTGCACCC GCGCGTGCAC GCAGGCATCC TCGCCGACAC CCGCAAGGCC
GACCACCTCG CCCAGCTCGA CGAGCTCGGC ATCACGCCCT TCGAGCTCGT GGTCGTCAAC
CTGTACCCCT TCACCGCGAC CGTCGCCTCG GGCGCCACCC CCGACGAGTG CGTCGAGCAG
ATCGACATCG GCGGACCGTC GATGGTGCGC GCCGCCGCCA AGAACCACCC GAGCGTCGCC
GTCGTCGTCG ACCCCGCCGC GTACCCCGAG GTCGTCGCCG CCGTCCAGGA CGGCGGGTTC
ACCTACGCCC AGCGCAAGGC GCTCGCCGCC CAGGCCTTCG TGCACACCGC GAGCTACGAC
GTCGCCGTCG CCACGTGGAT GAGCGAGGTC GTGTCGCCCA CCGACGTCGT GCTCACCGAG
GGGACCGACG GCCTCGGCGT CTCGACCGGG TTCCCGTCCT GGCGCGGGGC CACGTGGACC
CGCTCCGACG TGCTCCGCTA CGGCGAGAAC CCGCACCAGG GTGCCGCGAT CTACGTCGCC
GAGGGGGCCA CCGGCGGACT CGCCCAGGCC GTCCAGCTGC ACGGCAAGGC CATGAGCTAC
AACAACTACG TCGACGCCGA CGCCGCATGG CGCGCCGCCC ACGACCACGA CGGCGCGACC
GTCGCGATCA TCAAGCACGC CAACCCCTGC GGCATCGCCG TCGGCACCGA CATCGCCGAC
GCGCACGCCA AGGCCCACGC CTGCGACCCG CTGAGCGCCT TCGGTGGGGT CATCGCCGCC
AACGGCATCA TCACCAAGGC TGCCGCGGAG CAGATCGCGC CGATCTTCAC CGAGGTGGTC
GTCGCCCCCG GCTTCGAGCC CGAGGCCGTC GAGATCCTCA GCGCCAAGAA GAACATCCGC
CTGCTCCAGG TCGACGGCGC GCCGTCGACG ACGGTCGAGA CCCGCCCGAT CAGCGGCGGT
CTCCTCGTCC AGGAGGTCGA CCTCGTCGAC GCCGCCTCCG AGACCGGTGG CGACGCACCC
GAGAGCTGGA CCCTCGCGAC CGGCGAGGCC GCCGACGCGC AGACGCTCGC CGACCTCGAG
TTCGCCTGGC GCGCGGTCCG CGCCGTGAAG TCCAACGCCA TCCTCCTCGC CGACGGCGGG
GCGTCCGTGG GCGTCGGCAT GGGTCAGGTC AACCGCGTGG ACTCCTGCCG TCTCGCGGTC
GAGCGTGCCA ACTCCGGTGA CGTCGAGCGT GCTCGTGGCG CCGTCGCGGC CTCCGACGCG
TTCTTCCCCT TCGCCGACGG CCTCCAGGTG CTCCTCGACG CCGGTGTCCG CGCCGTCGTG
CAGCCGGGCG GGTCCGTCCG TGACGCCGAG GTCGTCGCCG CGGCCGAGGC CGCCGGTGTG
ACGCTCTACC TCACCGGGAC GCGCCACTTC GCGCACTGA
 
Protein sequence
MSAAHPSVPV AQLDDDSQRP VRRALVSVYD KTGLAELAQA LHAAGVEIVS TGSTASTIAA 
AGVPVTGVEE LTGFPECLEG RVKTLHPRVH AGILADTRKA DHLAQLDELG ITPFELVVVN
LYPFTATVAS GATPDECVEQ IDIGGPSMVR AAAKNHPSVA VVVDPAAYPE VVAAVQDGGF
TYAQRKALAA QAFVHTASYD VAVATWMSEV VSPTDVVLTE GTDGLGVSTG FPSWRGATWT
RSDVLRYGEN PHQGAAIYVA EGATGGLAQA VQLHGKAMSY NNYVDADAAW RAAHDHDGAT
VAIIKHANPC GIAVGTDIAD AHAKAHACDP LSAFGGVIAA NGIITKAAAE QIAPIFTEVV
VAPGFEPEAV EILSAKKNIR LLQVDGAPST TVETRPISGG LLVQEVDLVD AASETGGDAP
ESWTLATGEA ADAQTLADLE FAWRAVRAVK SNAILLADGG ASVGVGMGQV NRVDSCRLAV
ERANSGDVER ARGAVAASDA FFPFADGLQV LLDAGVRAVV QPGGSVRDAE VVAAAEAAGV
TLYLTGTRHF AH