| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_27790 |
|---|
| Symbol | |
|---|
| ID | 8634413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3098818 |
|---|
| End bp | 3099672 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | predicted metal-dependent phosphoesterase, PHP family |
|---|
| Protein accession | YP_003315515 |
|---|
| Protein GI | 269796060 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0386409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.775526 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCCGCG ACCTCCTGAT CGACCTCCAC ACCCACTCGA ACGCGTCCGA CGGCACGGAG
AGCCCGGCTG GTGTCGTCGG GTCGGCTGCC GCGGCCGGTC TCGACGTGGT CGCGCTCACC
GACCACGACA CCACCGCGGG CTGGGACGAG GCCGCCGAGG CGGCGCTGCG GTCCGGGGTC
GCGCTGGTCC GGGGGACCGA GGTGTCGGCC CGCTCCGCCG GGATCAGCGT GCACCTGCTG
AGCTACCTGC ACGACCCGAC CCACCCGGCC CTCGTGGCCC AGAACGACGA GGTGCGGCTG
GCGCGCTCCG ATCGCGCCCG CACCATGGTG CGGCTGCTCG GGCGCGACTT CGACGTCACC
TGGGACGACG TCCTCGCCCA GACCGAGCCC GGCACCACCA TCGGCCGACC GCACATCGCC
GACGCCCTGG TGCACGCCGG CTACGCGCCG GACCGGTCGG CGGCCTTCGC CACGATCCTG
CGGACCGGGT CGGACTACTA CGTGCCCCAC TACGCCCCGG ACGCCCTCGA CGCGATCCGT
GCCGTCCGCG CGGCCGGCGG GGTGCCGGTC TTCGCGCACC CGGGCGCCGA CGGCCGCGGA
CGTGTGGTGG GCGACGAGGT CATCGAGGAG ATGGCCGCAG CGGGCCTCCT GGGGCTCGAG
GTGCAGCACC GCGACAACGG TCCGGAGCAG CAGCGGCGAC TCACTATGAT GGCCCGGTCC
CTCGACCTCT TCGTGACCGG CTCGAGCGAC TACCACGGAG CCGGTAAACC CAACCGGCTC
GGCGAGAACA CCACAGACCC CGCGGTGCTC GCCCTGATCG AAGAGATAGG TCGTAGTGAC
GTGATCCGCC CGTGA
|
|---|
| Protein sequence | MPRDLLIDLH THSNASDGTE SPAGVVGSAA AAGLDVVALT DHDTTAGWDE AAEAALRSGV
ALVRGTEVSA RSAGISVHLL SYLHDPTHPA LVAQNDEVRL ARSDRARTMV RLLGRDFDVT
WDDVLAQTEP GTTIGRPHIA DALVHAGYAP DRSAAFATIL RTGSDYYVPH YAPDALDAIR
AVRAAGGVPV FAHPGADGRG RVVGDEVIEE MAAAGLLGLE VQHRDNGPEQ QRRLTMMARS
LDLFVTGSSD YHGAGKPNRL GENTTDPAVL ALIEEIGRSD VIRP
|
|---|
| |