Gene Sked_27670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27670 
Symbol 
ID8634401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3084673 
End bp3085437 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003315503 
Protein GI269796048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.208365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCAG AGACCCGGCG TTCGAGGCCC TACTCTGGCC GTGTGGTCAA CCACCCTCCA 
CCCGATCCAC ACAGACGCCT GCGGCCCCGC ATGCCCAAGT CCGAGCGTCA GGCGCAGATC
CTCACGATCG CCCAGGACCT CTTCGCGACC CACGGCTTCC ACCACATCTC CATGGACGAC
ATCGCCGAGC GCGCCGAGGT GTCCAAGCCG ATCCTGTACC GCCACTTCCC GTCGAAGCTC
GACCTGTACC TCGCGGTGAT CGACGAGCGC GGCCAGGCCT TGGTCGACTC CGTGGCGCTC
GCCCTCGTCC CGGTCCGCGA GGCTGCTGCG GCCGCCGCGG CGTCGGGGAA CGCCGACCGT
GACGTCGACG GGTACGCGGT GGTGCACGCG GTGGTCCGTG CCTACGTCGA CTTCGCCGAC
GGGTGCGGCG TCGCCGCGTC GCTGCTCTTC GAGTCCGACG TCACGCGCGA CGACGTGGTC
CGCGAGCGCG TCGAGGAGCC CAACCGGCGC AACGCCGAGC TGTTCGCGGC GGCGCTGGCG
ACGTTCACCG ACCTCACGGA GGCCCAGACG CTCACGGTCG CCCGCACCGC GACGGTCATG
GCCCGGGTGG CGGCCTCCGA CACGCTGCGG GCCGATCGCG ACGCCGACAC GGCCCGCGCC
GCGGACGGCG AGACGACGAT GGACACCGCC GAGCTGGTCG CACAGTTCGC TTGGCGCGGA
ATTCACGGGA TGGTGCGACG CGAAGTGCCC TCCGAGGGGC GATGA
 
Protein sequence
MLPETRRSRP YSGRVVNHPP PDPHRRLRPR MPKSERQAQI LTIAQDLFAT HGFHHISMDD 
IAERAEVSKP ILYRHFPSKL DLYLAVIDER GQALVDSVAL ALVPVREAAA AAAASGNADR
DVDGYAVVHA VVRAYVDFAD GCGVAASLLF ESDVTRDDVV RERVEEPNRR NAELFAAALA
TFTDLTEAQT LTVARTATVM ARVAASDTLR ADRDADTARA ADGETTMDTA ELVAQFAWRG
IHGMVRREVP SEGR