| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_27250 |
|---|
| Symbol | |
|---|
| ID | 8634359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3032569 |
|---|
| End bp | 3033078 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function (DUF664) |
|---|
| Protein accession | YP_003315463 |
|---|
| Protein GI | 269796008 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0119129 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.205212 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGATG TGACGCAGGG CACCCCGAGG ACGCAGCCTC CGGGACGTGG CGACGAGAAG
AGCACCCTCA TGGGGTTCCT CATGCTCAAC CGCGAGACCG TGGTGATCAA GGCCCAGGGG
CTGTCCGACG AGGACGCCGC GCGGCGTCTC GTCCCGAGCC TGACCACGGT GTCCGGGATC
ATCCGGCACC TCGCCGACGT CGAGCGCTCG TGGTTCGTCG AGGCCGTCGA GCAGCGGCCC
TACGACCGCC GGTTCGGCGG GGACGACGAC CCGGACGGCG AGTTCCGCGT CACCGGGGCG
GACTCGCTCG CCGAGATCGT CGAGGACTAC CGGGCTGCGT GGGCCGAGGC GGACGAGGTC
CTGCTCCGGC ACGACCTCGA CGAGGCGCCG GAGAACCCGG AGTACCCGTC CTTGCGCTGG
GTGCTCGTCC ACGTCATCGA GGAGACCGCG CGCCACCTCG GCCACGTCGA CATCCTCCGC
GAGCTCCTCG ACGGGGTCAC GGGGGAGTAG
|
|---|
| Protein sequence | MGDVTQGTPR TQPPGRGDEK STLMGFLMLN RETVVIKAQG LSDEDAARRL VPSLTTVSGI
IRHLADVERS WFVEAVEQRP YDRRFGGDDD PDGEFRVTGA DSLAEIVEDY RAAWAEADEV
LLRHDLDEAP ENPEYPSLRW VLVHVIEETA RHLGHVDILR ELLDGVTGE
|
|---|
| |