| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_27050 |
|---|
| Symbol | |
|---|
| ID | 8634339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3016253 |
|---|
| End bp | 3018355 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | K+-transporting ATPase, B subunit |
|---|
| Protein accession | YP_003315443 |
|---|
| Protein GI | 269795988 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.353821 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCC TGTCCTGGCC GCAGGTGCGG TCCGCCCTCC CGGGCGCCTT CCGCAAGCTC
GACCCGCGCG AGCTGCTCGG GTCGCCGGTC CTGCTCATCG TCGAGATCGG CGCCGTCGCG
TCGACAGTCC TCGCCGTCGC CGACCCGTCG GTCTTCGCCG CGACCATCGT CGTGTGGCTG
TGGGCCACGG TGCTCTTCGC GACGCTCGCC GAGTCCATCG CCGAGAGCCG CGGCAAGGCG
CAGGCGTCGT CGCTGCGTGC CACGCAGACC CAGACCACCG CCCGCCGCGT CGACGCGCCG
GTCGAGACCA CCCGGTACAC CGGCAACCTG CTGTCGCTCC CGACGGTCGA GGTCGCGTCG
TCCTCGCTCG CGGTCGGCGA CGTGGTCGTC GTCCGGGCCG GCGAGGTGAT CCCCGGTGAC
GGCGACGTGA TCGAGGGTGC CGCGTCGGTC GACGAGTCGG CCATCACGGG GGAGTCCGCA
CCGGTCATCC GCGAGTCGGG CGGTGACCGC TCGGCCGTCA CCGGCGGGAC CGTGGTGCTC
TCCGACACCG TGGTCGTACG CATCACCGCG GCTGCCGGGT CGACCTTCGT CGACCGCATG
ATCTCCCTCG TCGAGGGTTC GGAGCGTCAG CGCACCCCCA ACGAGATCGC GCTCAACATC
CTGCTGACCT CGCTGACCAT CATCTTCCTG CTCGCCGTCG TCACCCTCCA GCCCTTCGCG
GTCTACTCGG GGTCCCGGCA GTCGCTGCTC GTGCTCACGG CCCTGCTCGT CTGCCTCATC
CCCACGACCA TCGGCGCGCT GCTCTCCGCC ATCGGCATCG CCGGGATGGA CCGCCTCGTG
CAGCGCAACG TGCTCGCGAT GTCCGGCCGG GCCGTCGAGG CTGCGGGCGA CGTCGACGTG
CTGCTCCTCG ACAAGACCGG CACCATCACC TACGGCAACC GGCAGGCGAG CGACTTGCTC
GTCGCACCCG GTGCGACGAT CGCGGACCTT GCCTCGGCAG CGCGTCTCGC CTCGCTCGCC
GACGAGACGC CCGAGGGGCG CAGCGTCGTC ACGCTGGTCG ACGAGAGCTA CGCCGAGCAC
GTCGCGACCA GCACCGACGA CGACACCGTC GTCGAGCTCG TGCCCTTCAG CGCGAGCACG
CGGATGAGCG GCATCGACGT ACGAGACGTC AGCACCCAGG TCAGCACCTC GGGAGGCGTC
CCGCAGACCA GCATCCGCAA GGGCGCCGCG AGCGCCGTGC GCGCCTGGGT GCACTCGACC
GGGGGCAGCA CGCCCGACCA GGTGCAGACG CTGGTCGACG GGGTGAGCGC GTCGGGCGGC
ACGCCGCTGG TGGTCGCGCG GCAGGCGGGG GCGGGACCGG CGCAGGTGCT CGGTGTGATC
CACCTCAAGG ACGTCGTGAA GACGGGCCTG CGCGAGCGCT TCGACGAGCT GCGGGCGATG
GGCATCCGGA CCGTCATGGT GACCGGTGAC AACGCGATCA CCGCGCGGGC CATCGCCGAG
GAGGCGGGCG TGGACGACGT GCTCGCGGAG GCCACCCCGG AGGACAAGCT GGCGCTGATC
CGCCGGGAGC AGGAGGGCGG TCACCTCGTG GCGATGTGCG GGGACGGCAC GAACGACGCC
CCGGCGCTCG CGCAGGCCGA CGTCGGTGTC GCGATGAACA CGGGGACGTC CGCGGCCAAG
GAGGCCGGCA ACATGGTCGA CCTCGACTCG GACCCGACCA AGCTCATCGA GGTCGTGCAG
ATCGGCAAGC AGCTGCTCAT CACGCGCGGG GCGCTGACGA CCTTCTCGAT CGCGAACGAC
ATCGCGAAGT ACTTCGCGAT CCTCCCCGCC ATGTTCATGG TGGTGTTCCC TCAGCTCGAG
GTGCTCAACG TCATGCGGCT CTCGAGCCCT GAGTCGGCGA TCGTCTCGGC GGTGGTCTTC
AACGCGCTGA TCATCGTGGT GCTCATCCCG CTGTCTCTCA AGGGTGTGGC GTACCGGCCC
GCGTCGGCCT CTACCATGCT GCGCCGCAAC CTCCTCGTCT ACGGGCTGGG CGGCCTGGTC
GCCCCGTTCC TCGGCATCAA GCTCATCGAC CTGCTCGCCT CGCTACTCCC CGGGATCGGC
TGA
|
|---|
| Protein sequence | MNRLSWPQVR SALPGAFRKL DPRELLGSPV LLIVEIGAVA STVLAVADPS VFAATIVVWL
WATVLFATLA ESIAESRGKA QASSLRATQT QTTARRVDAP VETTRYTGNL LSLPTVEVAS
SSLAVGDVVV VRAGEVIPGD GDVIEGAASV DESAITGESA PVIRESGGDR SAVTGGTVVL
SDTVVVRITA AAGSTFVDRM ISLVEGSERQ RTPNEIALNI LLTSLTIIFL LAVVTLQPFA
VYSGSRQSLL VLTALLVCLI PTTIGALLSA IGIAGMDRLV QRNVLAMSGR AVEAAGDVDV
LLLDKTGTIT YGNRQASDLL VAPGATIADL ASAARLASLA DETPEGRSVV TLVDESYAEH
VATSTDDDTV VELVPFSAST RMSGIDVRDV STQVSTSGGV PQTSIRKGAA SAVRAWVHST
GGSTPDQVQT LVDGVSASGG TPLVVARQAG AGPAQVLGVI HLKDVVKTGL RERFDELRAM
GIRTVMVTGD NAITARAIAE EAGVDDVLAE ATPEDKLALI RREQEGGHLV AMCGDGTNDA
PALAQADVGV AMNTGTSAAK EAGNMVDLDS DPTKLIEVVQ IGKQLLITRG ALTTFSIAND
IAKYFAILPA MFMVVFPQLE VLNVMRLSSP ESAIVSAVVF NALIIVVLIP LSLKGVAYRP
ASASTMLRRN LLVYGLGGLV APFLGIKLID LLASLLPGIG
|
|---|
| |