Gene Sked_26140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_26140 
Symbol 
ID8634248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2905663 
End bp2907660 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content70% 
IMG OID 
ProductATPase component of various ABC-type transport systems with duplicated ATPase domain 
Protein accessionYP_003315352 
Protein GI269795897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0117472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA CAGCACGCCA GGAGCCGCTC CTGGAGATCC GTGACCTCGA CGTCACGTTC 
ACCACCCTCA ACGGGGAGGT GCCCGCTGTC CGCGGCGCCA ACCTCACGAT CTACCCCGGC
CAGTCCGTCG CGATCGTCGG CGAGTCCGGC TCGGGGAAGT CGACGACCGC GCACGCGATC
ATCAGCCTGC TCCCGGGCAC CGGCAAGGTG ACCGGTGGGT CGATCCGCTT CGACGGCCAG
GAGATCACGA CCGCGTCGAA GAAGGAGATC GTGGCCCTCC GCGGGGACCA GATCGGTCTC
GTCCCGCAGG ACCCGATGTC GAACCTCAAC CCCGTGTGGA GCATCGGCTT CCAGGTGAAG
GAGGCGCTGG CCGCCAACAA CATCGACGTC TCCCGCGGGA CGCGCAAGGG CCTCGCCCAG
GCGATCGGCT CGAGCGAGGA CTCCGTCGCT GGCGGCGACC TGCTCATCGG CCGCAAGGGC
AAGGCCTCGC TGCTCGAGGT GCTGCGCACC TCGCTCGCCG CGCAGGCCGG TCTCGACGCC
GCAGCGGTCG ACTCCGCCGT CGCGACGGCG GACGAGCGCA TCGTCGTCGG CTCGACGACC
AAGGCCTCGG CCGTGAGCAT CCTCGAGGAG GTCGGGCTCG CCTCGGCGCG CTCGGTCGTC
GAGGCCGAGA CCTCCGTGGC GAACGTCGAC GACCGCGTCG CCGGGCTCCT CGCCGAGGCC
GGGCTGCCGG ACGCGGTCCG CCGTGCCAAG CAGTACCCGC ACGAGTTCTC CGGCGGCATG
CGCCAGCGTG CGCTCATCGC CATCGGTCTC GCGTCGCGGC CCAAGCTGCT CATCGCCGAC
GAGCCCACCT CGGCGCTCGA CGTCACCGTG CAGCGGACCA TCCTCGACCA CCTCGAGGGG
CTGACCCGTG AGCTCGGGAC GGCCGTCCTG TTCATCACGC ACGACCTCGG TCTCGCGGCC
GAGCGGGCCG AGCACCTCGT GGTCATGTAC CGCGGTCGTG TGGTCGAGTC CGGCCCGTCG
CGCGAGATCC TCGCGAACCC GCAGCACCCC TACACGCAGC GCCTCGTCGC CGCGGCCCCG
TCGCTCGCCT CGCGCCGCAT CCAGTCGGCC AAGGAGCGCG GCGAGCAGTC GCAGGACCTC
CTCGCGGCCA CCGGTGGTGA CGGCGTCCGC GCGAACCGCG AGGACGTCGT GGTGGTGGAG
AACCTCACCA AGGTGTTCCA GATCCGTGGG TCCGGCAAGA ACAAGGACTT CAAGGCCGTG
GACGACGTGT CGTTCACGAT CAAGAAGGGC ACGACGGTCG CGCTCGTGGG GGAGTCGGGC
TCCGGCAAGT CCACGGTCGC GAACATCATG CTCAACCTGC TCGACCCGAC CGAGGGCAAG
ATCTACTTCG ACGGCGTCGA CCTCTCGACG CTCGGCCAGC GGGAGCTCTT CGACTTCCGC
CGGCGCGTGC AGCCGATCTT CCAGAACCCG TACGGCTCGC TCGACCCGAT GTACTCCATC
TTCCGGACCA TCGAGGAGCC GCTGCGGATC CACAAGGTCG GCAGCAAGAA GCAGCGTGAG
GCCCGCGTCC GCGAGGTCCT CGACATGGTG GCGCTGCCGC AGTCGACGAT GCGCCGGTTC
CCCAACGAGC TCTCGGGAGG CCAGCGCCAG CGCATCGCCA TCGCGCGTGC GCTCGCCCTG
CGCCCGGAGA TCATCGTGTG CGACGAGGCC GTCTCGGCCC TCGACGTGCT GGTCCAGGCC
CAGATCCTCG AGCTGCTCAA CGACCTGCAG TCCGAGCTCG ACCTGAGCTA CCTGTTCATC
ACGCACGACC TCGCGGTGGT CCGCCAGATC GCCGACCAGG TGTGCGTCAT GAAGAACGGT
CGGATCATCG AGTCCGCGAC GACCGACGAG GTCTTCGACA CCCCGCGCGA GCAGTACACG
CGCGAGCTGC TCGGCGCGAT CCCGGGCTCG CGCCTGGACG TCGTCCCGAG CGGACCGGAG
GACCTCGACC CGAGGTGA
 
Protein sequence
MSATARQEPL LEIRDLDVTF TTLNGEVPAV RGANLTIYPG QSVAIVGESG SGKSTTAHAI 
ISLLPGTGKV TGGSIRFDGQ EITTASKKEI VALRGDQIGL VPQDPMSNLN PVWSIGFQVK
EALAANNIDV SRGTRKGLAQ AIGSSEDSVA GGDLLIGRKG KASLLEVLRT SLAAQAGLDA
AAVDSAVATA DERIVVGSTT KASAVSILEE VGLASARSVV EAETSVANVD DRVAGLLAEA
GLPDAVRRAK QYPHEFSGGM RQRALIAIGL ASRPKLLIAD EPTSALDVTV QRTILDHLEG
LTRELGTAVL FITHDLGLAA ERAEHLVVMY RGRVVESGPS REILANPQHP YTQRLVAAAP
SLASRRIQSA KERGEQSQDL LAATGGDGVR ANREDVVVVE NLTKVFQIRG SGKNKDFKAV
DDVSFTIKKG TTVALVGESG SGKSTVANIM LNLLDPTEGK IYFDGVDLST LGQRELFDFR
RRVQPIFQNP YGSLDPMYSI FRTIEEPLRI HKVGSKKQRE ARVREVLDMV ALPQSTMRRF
PNELSGGQRQ RIAIARALAL RPEIIVCDEA VSALDVLVQA QILELLNDLQ SELDLSYLFI
THDLAVVRQI ADQVCVMKNG RIIESATTDE VFDTPREQYT RELLGAIPGS RLDVVPSGPE
DLDPR