Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_25820 |
Symbol | |
ID | 8634216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 2867892 |
End bp | 2869730 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | succinate dehydrogenase subunit A |
Protein accession | YP_003315320 |
Protein GI | 269795865 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.722118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.667788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACCC ATCAGTACGA CGTCGTGATC GTCGGCGCCG GCGGCGCAGG CATGCGCGCG GCCCTGGAGG CGTCCGGCGA AGTCCGCACC GCCGTGATCT CCAAGCTCTA CCCCACGCGC TCCCACACCG GCGCGGCGCA GGGCGGCATG TGCGCCGCCC TCGCCAACGT CGAGGAGGAC AACTGGGAGT GGCACACCTT CGACACGGTC AAGGGTGGTG ACTACCTGGT CGACCAGGAC GCCGCCGAGA TCATGGCGAA GGAGGCCATC GACGCGGTCC TCGACCTCGA GCGCATGGGC CTGCCCTTCA ACCGCACCCC CGAGGGCAAG ATCGACCAGC GCCGCTTCGG CGGGCACACC CGCAACCACG GCGAGGCCGC CGTCCGCCGC TCGTGCTACG CCGCGGACCG CACCGGTCAC ATGATCCTGC AGACGCTCTA CCAGAACTGC GTCAAGCAGG ACGTGGAGTT CTTCAACGAG TTCTACGTCC TCGACCTCAT CGTCGACCAC GACCTCTCCG AGGGGCACGT CCCCGACGGC GAGGAGGTCA ACGCGACCGG TGTCGTCGCC TACGACCTCG CCACCGGCGA GATCCACGTC TTCCAGGCCA AGGCGATCAT CTTCGCGACC GGCGGCGCCG GCAAGATCTA CAAGACGACC TCGAACGCCC ACACCCTCAC CGGTGACGGC ATGGCGCTCG CGCTGCGCCG CGGCTTCCCG CTCGAGGACA TGGAGTTCTT CCAGTTCCAC CCGACAGGCC TCGCCGGCCT CGGCATCCTC CTCTCGGAGG CGGCCCGCGG CGAGGGCGGG ATCCTGCGCA ACGGCGACGG CGAGCGCTTC ATGGAGCGCT ACGCCCCAAC CATCAAGGAC CTCGCCCCGC GCGACATCGT CGCCCGGTCG ATGGCCAACG AGGTCCGCGA GGGCCGCGGA GCCGGGCCGA ACAAGGACTA CGTCCTCCTC GACCTCACGC ACCTCGAGCC GGCTCACATC GACGCCAAGC TCCCGGACAT CACCGAGTTC GCACGCACCT ACCTCGGCAT CGAGCCCTAC ACCGAGCCCG TGCCGGTCTA CCCGACCGCG CACTACGCGA TGGGTGGCAT CCCCACCAAC GTCGACGCCG AGGTGCTGCG CAACAACACC GACGTCGTCC GCGGCCTCTA CGCCGCCGGC GAGGTCGCCT GCGTGTCCGT CCACGGCTCC AACCGTCTCG GCACCAACTC GCTCCTCGAC ATCAACGTCT TCGGCAAGCG CGCCGGCCGT ACCGCCGCCG CGTACGCCAA GACCGCGACC TTCCGGGACC TCCCCGAGGA CGCCGCGGAC TCCGTGATCG CGACGCTCGA CGAGATGCGT GGCCGTCCCG ACGGCGAGCG GGTCTCCGAC ATCCGTCGTG AGCTGCAGGA GACCATGGAC GCCAACGCCC AGGTGTTCCG CACCGAGGAG TCGCTGCGCA CCTGCCTCGC GGACATCCGC ACGCTGCAGG ACCGCTACAA GAACGTCTCG GTCCAGGACA AGGGTCGGCT GTTCAACACG GACCTGCTCG AGGCCCTCGA GCTCGGGTTC CTCCTCGACA TCGCCGAGGT CGTCGTCATC GGCGCCCTCA ACCGCAAGGA GTCTCGCGGC GGTCACTTCC GCGAGGACTT CCCCGACCGC GACGACGAGA AGTTCATGCT CCACACGATG GCGTACCGGC GCCCGCTCGA CGACTCGGCC ACGGTCGAGA GCGTCGACGG CACCGAGGGC GTCTTCTCCG AGCAGAGCGT CTTCGACACC TACAAGGTCA TGCTCGGCGG CAAGTCCGTC GTGCAGACCC GGTACGAGCC CATGGAGCGT AAGTACTGA
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Protein sequence | MQTHQYDVVI VGAGGAGMRA ALEASGEVRT AVISKLYPTR SHTGAAQGGM CAALANVEED NWEWHTFDTV KGGDYLVDQD AAEIMAKEAI DAVLDLERMG LPFNRTPEGK IDQRRFGGHT RNHGEAAVRR SCYAADRTGH MILQTLYQNC VKQDVEFFNE FYVLDLIVDH DLSEGHVPDG EEVNATGVVA YDLATGEIHV FQAKAIIFAT GGAGKIYKTT SNAHTLTGDG MALALRRGFP LEDMEFFQFH PTGLAGLGIL LSEAARGEGG ILRNGDGERF MERYAPTIKD LAPRDIVARS MANEVREGRG AGPNKDYVLL DLTHLEPAHI DAKLPDITEF ARTYLGIEPY TEPVPVYPTA HYAMGGIPTN VDAEVLRNNT DVVRGLYAAG EVACVSVHGS NRLGTNSLLD INVFGKRAGR TAAAYAKTAT FRDLPEDAAD SVIATLDEMR GRPDGERVSD IRRELQETMD ANAQVFRTEE SLRTCLADIR TLQDRYKNVS VQDKGRLFNT DLLEALELGF LLDIAEVVVI GALNRKESRG GHFREDFPDR DDEKFMLHTM AYRRPLDDSA TVESVDGTEG VFSEQSVFDT YKVMLGGKSV VQTRYEPMER KY
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