Gene Sked_25470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_25470 
Symbol 
ID8634181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2827870 
End bp2828646 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content70% 
IMG OID 
Productpredicted membrane protein 
Protein accessionYP_003315285 
Protein GI269795830 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.169686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.191166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACCA GGACGGGCGG CGCGAGCCAG CACCGCGACG ACATCCCGGG GGCTGCGTCG 
GGGGACCCGG GCTCCCGGGC GGACCTGGGT ACCGCGGGAG ACCTGCTGGC CCGTGACGTC
TCGGACCTGT CGGACGAGGA CCTCACCGAC GAGCGCCTCG CCGCGGCTGC CGACGCGATG
GTCGGCTTCC GGCACTCGGA CCGGTGGATC TTCGGGACGA TGCTCCTGTC GGCCACCCTC
AGCCTGGTGG CGGCCTTCGT GCTCTCGTAC GACGCCGTGG TGCTCGCGGC GAACCCGACG
GCCGAGCTCA GCTGCGACGT CAACGCCGTG CTCAGCTGCG GCAGGGTCGC GCTCTCGTGG
CAGGCCAGCG TCTTCGGCTT CCCCAACGCG TTCCTCGGCA TGGTGACCGA GCCGGTGGTG
ATCACCATCG CGGTGGCCGG GCTGTCCGGG GTGCGCTTCC CCCGGTGGTT CATGTTCGCG
GCGCAGGTCG TCTACGCCCT GGGCCTCGCC TTCGCGCTCT GGCTGTTCAG CCAGTCGATG
TGGGTCATCG GTGCGCTGTG CCCCTGGTGC ATGCTCATCA CGGTCTCGAC GACCCTGGTG
TTCCTCACCC TGCTGCACTA CAACGTCCGC GAGGGCAACC TCTACCTGCC GGCTGCCGCC
CAGCGGCGAG CCCGCTCGTG GGTGCGCGAG GACTACGACC TGTACGCGGG CATCCTCGTG
GTCGTCGTGT TCGCGGCGCT CGTGCTCCTG AAGCACGGTG CGGTGCTGTT CAGCTGA
 
Protein sequence
MGTRTGGASQ HRDDIPGAAS GDPGSRADLG TAGDLLARDV SDLSDEDLTD ERLAAAADAM 
VGFRHSDRWI FGTMLLSATL SLVAAFVLSY DAVVLAANPT AELSCDVNAV LSCGRVALSW
QASVFGFPNA FLGMVTEPVV ITIAVAGLSG VRFPRWFMFA AQVVYALGLA FALWLFSQSM
WVIGALCPWC MLITVSTTLV FLTLLHYNVR EGNLYLPAAA QRRARSWVRE DYDLYAGILV
VVVFAALVLL KHGAVLFS