| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_25290 |
|---|
| Symbol | |
|---|
| ID | 8634163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2811781 |
|---|
| End bp | 2812509 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| Protein accession | YP_003315267 |
|---|
| Protein GI | 269795812 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.422331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCG TCGTCTCGCT CCGGCAGGTC TCCCGGGAGT ACCCGGGAGG TGTCCGTGCC
CTGGACGGTG TCGACCTCGA GGTGCAGCGC GGCGAGCTCG TCGCGGTGGT CGGCAGCTCC
GGGTCGGGCA AGTCGACCAT GCTCAACGTC ATCGGCACGC TCGACCGGTG CTCGTCCGGG
ACCGTCGCGA TCGACGGCCA CCTGGTCGAA GACCTCTCGG ACCGTGACCT CTCAGCCCTG
CGGGCGACGC GGATCGGGTT CGTGTTCCAG CACTTCCACC TGTCGGCGGG CACTGCCGCG
ATCGACAACG TCGCGGACGG GCTGCTGTAC CGCGGGGTGC GGCGCGCCGA GCGGCGTGAC
CGAGCGGCGG CGGTCCTCGA CCGCGTCGGG CTGGGCACGC GCCTGGGGCA CCGTCCGAAC
GAGCTGTCCG GAGGGGAGAA GCAGCGGGTC GCGATCGCGC GAGCCGTCGT CGGAGAACCT
CCGCTGCTCC TCGCGGACGA GCCGACGGGG GCGCTCGACT CCGTCTCGGG CGCCGGGATC
GTCGAGCTCC TCCGCGAGCT CAACACCGCG GGCACCACGA TCGTCGTGAT CACCCACGAC
CGGGACCTCG CCGCGATGCT GCCTCGGCAG GTCACGGTCC GGGACGGGCG CATCGTGCCG
CCCGAGCACC CGGAGGCGGT GCGGGCTGCA CGCCCCGAGC GTCCTGCCCG GCCGGAGCAG
CCATGCTGA
|
|---|
| Protein sequence | MTAVVSLRQV SREYPGGVRA LDGVDLEVQR GELVAVVGSS GSGKSTMLNV IGTLDRCSSG
TVAIDGHLVE DLSDRDLSAL RATRIGFVFQ HFHLSAGTAA IDNVADGLLY RGVRRAERRD
RAAAVLDRVG LGTRLGHRPN ELSGGEKQRV AIARAVVGEP PLLLADEPTG ALDSVSGAGI
VELLRELNTA GTTIVVITHD RDLAAMLPRQ VTVRDGRIVP PEHPEAVRAA RPERPARPEQ
PC
|
|---|
| |