Gene Sked_24710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_24710 
Symbol 
ID8634106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2754827 
End bp2756509 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content67% 
IMG OID 
ProductATPase component of ABC transporters with duplicated ATPase domain 
Protein accessionYP_003315217 
Protein GI269795762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0377191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.041371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAGT TCATCTACTC CATGTACAAG ACGCGCAAGG CGCACGGCGA CAAGGTCATC 
CTCGATGACG TGACGCTGAA CTTCCTCCCC GGGGCGAAGA TCGGGGTCGT CGGCCCCAAC
GGTGCCGGCA AGTCGACCAT CCTCAAGATC ATGGCGGGCC TCGAGCAGCC CTCCAACGGC
GAGGCACGCC TGTCTCCCGG CTTCTCCGTG GGCATCCTGC TGCAGGAGCC GCCGCTCAAC
GAGGAGAAGA CCGTCCTCGG CAACGTCGAG GAGGGCGTCG CCGAGATCAA GGGAAAGCTC
GACCGCTTCA ACGAGATCTC GGCGCTGATG GCCGAGCCCG ACGCGGACTT CGACACGCTC
CTCGCCGAGA TGGGCGAGCT CCAGGAGGCG CTCGACCACG CCGACGCGTG GGACCTCGAC
GCCCAGCTCG AGCAGGCCAT GGACGCGCTG CGCTGCCCGC CGCCGGACGC CGACGTCAAG
GTGCTCTCCG GTGGTGAGCG CCGCCGCGTG GCGCTGTGCA AGCTGCTCCT CGAGAAGCCC
GACCTGCTCC TCCTCGACGA GCCCACCAAC CACCTCGACG CCGAGTCCGT GCTCTGGCTC
GAGCAGCACC TGTCGTCCTA CGCCGGCGCG ATCCTCGCCG TCACCCACGA CCGGTACTTC
CTCGACCACG TCGCGGAGTG GATCTGCGAG GTCGACCGCG GACGCCTGTA CCCCTACGAG
GGCAACTACT CGACCTACCT CGAGAAGAAG GGCGAGCGCC TCAAGGTCCA GGGCAAGAAG
GACCAGAAGC TCGCCAAGCG TCTCGCGGAC GAGCTCGAGT GGGTCCGGAT GAACGCCAAG
GGCCGCCAGA CCAAGTCGAA GGCGCGCCTG GCGCGCTACG AGGAGATGGC CGCCGAGGCG
GACCGTCACC GCAAGCTCGA CTTCGAGGAG ATCCAGATCC CCCCGGGCCC GCGCCTCGGC
GCGATCGTCA TCGAGGCGAA GGACCTCAAC AAGGGCTTCG ACGGGCGCAC GCTCATCGAC
GGCCTGTCCT TCACGCTCCC GCGGAACGGC ATCGTCGGCG TCATCGGCCC GAACGGTGTC
GGCAAGACGA CCCTGTTCAA GACGATCGTC GGCATGGAGC CCCTCGACGG CGGTGAGCTC
AAGGTCGGCG AGACCGTGAC CATCTCCTAC GTCGACCAGT CTCGTGGCGG CATCGACCCC
GAGAAGTCGC TCTTCGAGGT CGTCTCCGAC GGCAACGACT ACATCAAGGT CGGCAACGTC
GAGATGCCCT CGCGCGCCTA CGTGGCCGCC TTCGGCTTCA AGGGCCCGGA CCAGCAGAAG
GCTGCCGGTG TGCTCTCCGG TGGTGAGCGC AACCGTCTCA ACCTGGCGCT CACCCTCAAG
CAGGGCGGAA ACCTCCTGCT GCTCGACGAG CCCACCAACG ACCTCGACGT GGAGACCCTC
GGCTCGCTCG AGAACGCTCT GCTCGAGTTC CCGGGCTGCG CCGTCGTGGT CTCGCACGAC
CGGTGGTTCC TCGACCGGGT GGCGACGCAC ATCCTCGCCT ACGAGGGCAC CGAGGAGAAC
CCGTCGTCGT GGTACTGGTT CGAGGGCAAC TTCGCCTCCT ACGAGGAGAA CAAGGTCTCG
CGTCTCGGCG CCGACGCGGC GCGTCCGCAC CGCGTCACGC ACCGGAAACT CACCCGAGAC
TGA
 
Protein sequence
MAEFIYSMYK TRKAHGDKVI LDDVTLNFLP GAKIGVVGPN GAGKSTILKI MAGLEQPSNG 
EARLSPGFSV GILLQEPPLN EEKTVLGNVE EGVAEIKGKL DRFNEISALM AEPDADFDTL
LAEMGELQEA LDHADAWDLD AQLEQAMDAL RCPPPDADVK VLSGGERRRV ALCKLLLEKP
DLLLLDEPTN HLDAESVLWL EQHLSSYAGA ILAVTHDRYF LDHVAEWICE VDRGRLYPYE
GNYSTYLEKK GERLKVQGKK DQKLAKRLAD ELEWVRMNAK GRQTKSKARL ARYEEMAAEA
DRHRKLDFEE IQIPPGPRLG AIVIEAKDLN KGFDGRTLID GLSFTLPRNG IVGVIGPNGV
GKTTLFKTIV GMEPLDGGEL KVGETVTISY VDQSRGGIDP EKSLFEVVSD GNDYIKVGNV
EMPSRAYVAA FGFKGPDQQK AAGVLSGGER NRLNLALTLK QGGNLLLLDE PTNDLDVETL
GSLENALLEF PGCAVVVSHD RWFLDRVATH ILAYEGTEEN PSSWYWFEGN FASYEENKVS
RLGADAARPH RVTHRKLTRD