Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_24290 |
Symbol | |
ID | 8634064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 2711149 |
End bp | 2712948 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | AMP-forming long-chain acyl-CoA synthetase |
Protein accession | YP_003315177 |
Protein GI | 269795722 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.954614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGT TCGCCTCCCC CAGCCTGACC GACGCACCGC CGAGCACGTC GATCAACACC CTCCTCGCCG ACCGGGTGCG CAGAGACGGG ACCGGCGTGC TCATCGAGCG CAAGACCCAC CTCGGGGACG CCTGGCAGCC GGTCACCGCC CAGCAGTTCG CCGACCAGGT CCTGGCGACC GCCAAGGGGC TCGTGGCGCG CGGCATCGAG GTGGGCGACC GCGTGGCGAT CATGTCGCGG ACCCGCTACG AGTGGACGCT GCTCGACTTC GCGGTCTGGG CGGTGGGTGC CGTGCCCGTG CCCGTCTACG AGACGAGCTC CGCCGACCAG ATCCGCTGGA TCTGCGGAGA CGCCGGCGTA CGCCTCGCGC TCGTCGAGAC CGCGACGCAC GCCTCGCTCG TCGACGAGGC ACGTGCGTCG CTCCCGGACC TCACCGACGT GCTCGTCATC GACGACGACG CCGTCGACCA GCTGCGCCTC GCCGGGTCCC AGGTCGAGAC CTCCGTGGTG ACGGCGCGCA GCGAGGCCGT CGTCGGCGAC GACCTCGCGA CGATCATCTA CACCTCGGGC ACCACCGGTC GTCCCAAGGG TGCCGAGCTC ACGCACCGGA ACTTCGTGTT CCTCACCCGC AACGGGGTCG AGGGGCTCGG CAACATCTGC GCCGTGCCCG GCGCGCGGTC GCTGCTGTTC ATGCCGCTCG CGCACGTCTT CGCCCGCTAC GTCGAGGTCC TGTGCATCAC GTCCGGGGCC GTCATGGGCC ACACGCCGGA CACGCGCAAC CTCCTCCCCG ACCTCGCGAC CTTCCAGCCG ACCTTCCTGC TGGCCGTGCC GCGGGTGTTC GAGAAGGTCT ACAACTCCTC CGAGCAGAAG GCCGGGAGCG GGGCGCGGCT CAAGCTGTTC CGCTGGGCGG CGAAGGTCTC GATCGCGATG TCCGAGGCCA CCTCGGGCGG CCCCGGCCCC TCGCCGGCCC TCAAGGCGCA GCACGCCCTC GCGAGCGCGC TCGTGTTCTC CAAGCTGCGC TCCGCGCTCG GCGGCAAGGC GCAGTACGCG ATCTCCGGCG GCGCTCCGCT CGGCGAGCGC CTGGGCCACT TCTACCGCGG CATCGGGCTC ACCATCCTCG AGGGCTACGG GCTCACCGAG ACGACGGCCC CCACCGCGGT GAACCGTCCG GGTCTCATCA AGATCGGGAC GGTCGGCCCG TCGTTCCCGG GGACGACGCT GCGGATCGAC GAGGACGGCG AGATCCTCGT CAGCGGCGAG CACGTGTTCC GGGGCTACCA CGACAACCCC GAGGCGACCG CCGAGGCGCT CGTCGACGGC TGGTTCCGCA CCGGTGACCT CGGGTCCCTC GACGACGACG GCTACCTGCG GATCACCGGT CGCAAGAAGG AGATCATCGT CACCGCCGGC GGCAAGAACG TCGCCCCGGC GATGCTCGAG GACCGGTTCC GCGGTCACCC CCTCGTCAGC CAGTGCGTGG TCGTCGGCGA CCAGAAGCCG TTCATCGCGG CGCTCGTGAC CCTCGACGCC GAGATGCTCC CCGGGTGGCT GCGCAGCAAG GGCCTGCCAG CCATGGACGT CGTCGCGGCG GGCAAGGACC CCGTGGTGCT CGAGGCGCTG CAGCGCGCCG TCGACCGCAC CAACGAGGCC GTCTCGCGCG CCGAGTCCAT CCGCAAGATC CACGTCCTCA GCACGGACTT CACCGAGCAC AACGGGTACC TCACCCCCTC CCTCAAGGTG AAGCGGGCCA AGGTGCTCAC GGACTTCGCC GGCGAGATCG AGCAGATCTA CGCGGGCTGA
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Protein sequence | MIEFASPSLT DAPPSTSINT LLADRVRRDG TGVLIERKTH LGDAWQPVTA QQFADQVLAT AKGLVARGIE VGDRVAIMSR TRYEWTLLDF AVWAVGAVPV PVYETSSADQ IRWICGDAGV RLALVETATH ASLVDEARAS LPDLTDVLVI DDDAVDQLRL AGSQVETSVV TARSEAVVGD DLATIIYTSG TTGRPKGAEL THRNFVFLTR NGVEGLGNIC AVPGARSLLF MPLAHVFARY VEVLCITSGA VMGHTPDTRN LLPDLATFQP TFLLAVPRVF EKVYNSSEQK AGSGARLKLF RWAAKVSIAM SEATSGGPGP SPALKAQHAL ASALVFSKLR SALGGKAQYA ISGGAPLGER LGHFYRGIGL TILEGYGLTE TTAPTAVNRP GLIKIGTVGP SFPGTTLRID EDGEILVSGE HVFRGYHDNP EATAEALVDG WFRTGDLGSL DDDGYLRITG RKKEIIVTAG GKNVAPAMLE DRFRGHPLVS QCVVVGDQKP FIAALVTLDA EMLPGWLRSK GLPAMDVVAA GKDPVVLEAL QRAVDRTNEA VSRAESIRKI HVLSTDFTEH NGYLTPSLKV KRAKVLTDFA GEIEQIYAG
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