| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_24150 |
|---|
| Symbol | |
|---|
| ID | 8634050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2693047 |
|---|
| End bp | 2694195 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component |
|---|
| Protein accession | YP_003315163 |
|---|
| Protein GI | 269795708 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.481096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGACAA CCACACCGTG GAGGACCGTC GCAGCCGCGA CGGTCGCCGC AGGGCTCGTG
CTCACCGGCT GCTCGAGCTC GGACGCGGAC GCCGACACGT CCACCGCAGG GGAAGGCGAG
GGCCTGACGC CCGTCAAGCT GCAGCTGCAG TGGCTCACCC AGGCGCAGTT CTCCGGCTAC
TACGCCGCGC TCGACCAGGG GTACTACGAG GAGCAGGGGC TCGACGTGGA GATCATCCCG
TCGGGCGGCG ACATCGTCCC GCAGGACGCC CTCGCCCAGG GGGAGGTCGA CTACGCGGTC
GCCTGGGTGC CCAAGGTGCT CGGCTCGATC GAGCAGGGCG CGAGTATCAC CAACGTCGCG
CAGGTCTTCG AGCGCTCGGC GACCCTCCAG GTCTCCTTCG CCGACGCGGG CATCGACTCC
GTCGAGGACC TCGCCGGGAA GAACGTCGGC TCCTGGGGCT ACGGCAACGA GTGGGAGCTG
TTCGCCGGGC TGGGGGAGGC GGGCGTCACC GACTACACGC TCGTCACCCA GGCCTTCGAC
ATGCTCGGGC TGCTCAACGG CGACATCGAC GCCGCGCAGG CCATGACCTA CAACGAGTAC
GCGCAGCTCC TCGAGACCGT GAACCCGGAC ACCGGCGAGC TCTACACGGC CGACGACTTC
TCCGTCATCG ACTGGAACGA CGAGGGCGTC GCCATGCTCC AGGACGCCGT CTGGGCTGAC
ACCGAGCGGC TCGAGTCCGA CCCGGCGTAC GAGGAGACCA CCGTCAAGTT CCTCACCGCG
ACCCTCAAGG GGTGGGCCTA CGCCCGCGAC AACCCCCAGG AGGCCGCCGA CATCGTGACG
GCCGCCGGGT CCACCCTCGG GACGAGCCAC CAGCTGTGGA TGGCCAACGA GGTCAACAAG
CTCATCTGGC CCAGCACCAC CGGTGGCATC GGCCTCGTCG ACCCCGCCGC GTGGGACAAG
ACCGTCGAGC TCGCCATGTC GACGCAGAAC GAGACCGGCT CGAGCATCAT CACCGAGGCA
CCGCCCGAGT CGGCCTACAC CTCCGAGTAC GTCCAGCAGG CCATCGACGC GCTCACCGAG
GAAGGCGTCG ACGTGGTCGG CGCCGACTAC GCGCCGATCG ACGTCACCCT CGCCGAGGGC
GGCAACTGA
|
|---|
| Protein sequence | MRTTTPWRTV AAATVAAGLV LTGCSSSDAD ADTSTAGEGE GLTPVKLQLQ WLTQAQFSGY
YAALDQGYYE EQGLDVEIIP SGGDIVPQDA LAQGEVDYAV AWVPKVLGSI EQGASITNVA
QVFERSATLQ VSFADAGIDS VEDLAGKNVG SWGYGNEWEL FAGLGEAGVT DYTLVTQAFD
MLGLLNGDID AAQAMTYNEY AQLLETVNPD TGELYTADDF SVIDWNDEGV AMLQDAVWAD
TERLESDPAY EETTVKFLTA TLKGWAYARD NPQEAADIVT AAGSTLGTSH QLWMANEVNK
LIWPSTTGGI GLVDPAAWDK TVELAMSTQN ETGSSIITEA PPESAYTSEY VQQAIDALTE
EGVDVVGADY APIDVTLAEG GN
|
|---|
| |