Gene Sked_24040 details

Gene Information

• Locus tag: Sked_24040
• ID: 8634039
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sanguibacter keddieii DSM 10542
• Kingdom: Bacteria
• Replicon accession: NC_013521
• Strand: +
• Start bp: 2677272
• End bp: 2682743
• Gene Length: 5472 bp
• Protein Length: 1823 aa
• Translation table: 11
• GC content: 68%
• Product: hypothetical protein
• Protein accession: YP_003315152
• Protein GI: 269795697

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 0.80248
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACTGCGA CGACCGACCT CTCCACGACC GCCGGCGAAC GGCTCGCGAA GCAGCTGGAC 
AGGTGGCGCA GGGAACTGAT CACCCTCGAC CGACGCCAGA GGCTGCTCTA CTTCAAGCAC 
ACGAAGAGCG CGTCGCTCGA GATCGAGATG ACGGACCCGA GCCACCTCAC CGATCTCGTG 
AGCGAAGGTC CGGTCCTCAT CCGTCCGCGA CCAGAGCAGA GCACGGAGCT GGTCGGGCAC 
GCGGACGACA GCGCCGCCGG ACGCAACGAC GACAGCTCGT TGCACGTGGT GGGGAAGACC 
GAGTCCGAGC TGCGCTCGAG CCTGCGTCGT CTCGACCAGG TGTCCCAGCA GACCTTCGCC 
GACCGAGGGA CCTGGACGCT CTACCTCACC GTCGGGATCC TCGAGTGGGA GGACCCTCAG 
GACCGGAAGC CCGTCCTCAG CCCTCTCCTG CTCCTGCCTG TCGTCCTCGG CCGGAACGGA 
GCAGACCAGC CGTACACAGT CCGGCGCACC CACGACGAGG CCCTGGTGAA CCCTGTGCTC 
CGCTTCAAGC TCGAGGAAGA CTTCGGGGTG GCCCTCCCCG AGGTCGACCC CGACGACTTC 
GAGGCCGACG ACCTCCTTCT CGACATCCAG AAGGTCGTCG CACAGCACGG CTGGACCGTC 
CACGACCGTT CGGTCCTGAC GTCCTTCTCG TTCCACAAGG AGGCCATCTA CAAGGACCTT 
CAGGAGAACG AGCAAGCCAT CGGAGAGAGC GGGCTGGTGC AGGTTCTCGC CCTGGGCCCC 
GACGCCCCCT CGGCAGGCAC CTTCGGCTTC GCGCCCCCGG ACGACGCCAC ACTGGACGAC 
TCGACTCCGC CCGAGACCCT CCACAACATC CTCGACGCAG ACGGTAGCCA GCGGAAGTGC 
ATCATCGCTG CACTCGACGG CAAGAGCTTC GTGATGGACG GACCTCCGGG GACCGGTAAG 
AGCCAGACCA TCGCGAACAT GATCGCGGAG CTCATGGCGA ACGGACGGAG CGTCCTCTTC 
GTGAGCGAGA AGATCGCCGC GCTCGACGTC GTGCGCAACC GGCTGGCACA GGTGTCCCTG 
GACTCGTTCG TCCTCGAGCT GCACAGTGCC GCAACCACGC GCAAGCACTT CTCCCAGGTG 
CTGGGGACAG CACTCCAGAA CCGCGTCAAG GCGCCGCCTG CCCTGTCCGC AGCGGACCTC 
AACGCGCTCG CGACCACGCG CGGCCGGCTG TCTGGGTACG CGGCGGCCAT GAACGAGCTG 
CGGCCGACCT TCAACCGCAG CATCCACTGG GCTCTCGGAC AGATCTCCCC GCTCGACCGC 
CTGGCTCACC TCCGCGCGCC CGCGGACCGC CGCTGGAGCC AGCTGTCCGA CAAGCGCCTC 
GCGGAGATCG AAGAGCACGC AGGTGCTCTC GGCCGTTCCT GGGACCCCGT GACACTCGGC 
GACCGATTCA TGTGGCGTGA CGTCCGCGTC GCCTCCGGCA CGGCGGACCC GGCACGTCTG 
CGCCGAGAGG TCGTCGGCGC CCACGACGCG GCTGGGCAGC TCGCCTCGCT CTGCGAGGCG 
GTCGACCACG ACCTCCAGGT CAGGCTGGGT CGCACCTCCG AGGCCGCCGG GATCAGGGGC 
TCGCTGCTGT CGGTGCTCGA GGCGCGCCCC GCCTCGGCCG ATCAAGCCCA CCTCACCGCT 
CGAGACCTCG ACGGCGTCTC GCGACGCGCG ACGGTACTCC GAGAAGCCTG CTCCGAGCAC 
CGAGCCGTGA TCCAGGAACT TCTCAGCACG ATCGGAACCG GCTGGATCCA GCTCGAGCCC 
GACGGGCTCG AGCAGCTGGC GGGGATCACG ACCCCGCACG ACCTCTGGAC CGTCCCCTCT 
GACCTCACAG CATCCGCGCT CGCCGAGGCG GTCGACATCG CAGAGAACCT GCCTCTCGTC 
ATCGCTGAGG TTCTCCAGGA CGGGCGTCGC CTCGCTGCTG CCTTCGGAGT AGAGCCGGCG 
TCCCTCTCTC TGAGGCGGAC CGAAGACCTG GCTGCCCTCG CCGATCTCAC CATGGAGTCG 
GCACTCCCGG AGAGCAACTG GCTCAACCCG GTGCTCGCGC ACGCGATCGA AGAGTCTCAG 
CGCGTCCTCA CGGGCCTCGT CAGCATCGTC GTCGCCAACC GTGACCGGAT GGCGTCGACG 
TTCACCCCCG AAGTCCTCGA GCTCGACCTC GTCGGGCTCA AGACACGTTT CGCGGGACCG 
AACACCGGCT TCGGTCGCTT CTCGAGCCAG GCCCGCGCTG ACCGCAAGAC ACTCCGCGGG 
GTCTCTGTCC GCGGAAAGGT GGACAAGGTC CTCCTCTCCT CCCTCGACGA CGCAGTCGCG 
TGGCAGCAGT CAGCGTCTCA GCTCGATCGG GGCGAAGGCG AGCACGGCGC ACGTCTCGGT 
TCCTACTACC AGCGGACCGA CACGGACTTC GAACGTCTCG GCAGGGCCCT GGGCGTCGCG 
CAGCGCGCGG TCCAGCTGGC CGGCGACGAC CTGGACCCGA CCGTCCTTGG GCGCCAGCTG 
AGCACCGAGC GGGTCGCCGA CCCATCGATC CCGTCGACCG CTCGCCGGCT CCGGTCGAGC 
CAGTCGTCCT TCGCGGAAGG CGCTCGGCGA GCCTTCGGCG ACGCGGCCGC GTCCCGCCTC 
TCGGAGCTCC CGCTGACCGC TGTGGCCGAC CTGCTCGTCG ACCTCACGTC CCGGCTCCGA 
CCACGGCTCA CCCTCCTCCA GGAGATCGCC GCCGTCGCAG GCGCCAACCT GACGGTCGCA 
TCTGCCTGCA CCGCGCTCGA GCGCGCCGGA GCGGCCTCCG ACGCGGAGGC AGAGGTGCTC 
AACTCCTATG CGGACGACCG GCTCGACCTC GGGGCCGCTT ACACCGGGCT AGACACCGAC 
TGGGACGCCC TAGAGTCGGC GCTCGAGTGG GCCGAGAAGG TCCGTGCGCT CGTCGGTACG 
AGCGTGTCTC CGGCGAGCGC AGATCGATTC TTCTCCCCGA CCCTGGCATC GACCGATCTC 
GCGCCGACAC TGACCCGGTG GGTCACGGCG CGTGACCGGT TGGTCTCGTC ATTCGCGCCA 
TCGCGCGGGA CCGACCTTCT CGCCGACCTC GACTCAGACC TCGACGAAGC GTCGATGCTG 
CTCGACGACA TGGTCAAGAC CTCGACGACA GAGATCGACA CGTGGCTCCG GTTCACCGAG 
TCGGTCGACT GGCTCGAGAA CAACGAGCTC CGCGAGCTGG TGGACGAGAT GGCGCGAGAG 
AAGACCCCGT CGGACCAGGT CGCCCTCGTG GTCCGCAGGG CCGTGATCGA GGCCTGGGTC 
GACGCGGTCT CCGCCGAGGA CCGTCGACTC AGCGACTACC GCCCCGACGA CCGGGACGCC 
CTGGTCAGTC GTTTCAGAGA GCTGGACGAG CGTCTGGTGA GCCAGAGCAA CGGTGCCGTG 
ATCGCGGCAT GCAACCAACG CCGCCCCGTG TCGGACTCGA GCCGAGGCGC CCAGGTCATC 
AGGCGCCAGG CGGAGCTGAA GTCGCGGCAC AAGGCGATCC GACAGGTGCT CACCGAGGCG 
GGGGACGTCG CGATCGCGCT CAAACCGTGC TTCATGATGA GCCCGCTCGC AGTCTCGCAG 
TACCTGCCGT CGGACATGCG GTTCGACGTC GTCATCTTCG ACGAGGCGTC CCAGGTGCTC 
CCGTCCGACG CCATCAACTG CATCTACCGC GCTCGACAGC TCATCGTCGC CGGTGACCAG 
AAGCAGCTGC CCCCGACCAG CTTCTTCGCG TCCGCCGCGT CCGAGGAGGA GGACGACGAC 
GAAGCCCTCG CCGACTTCAG CTCTGTGCTG GACCTGTGCA AGGGGTCGGG TGGTCTCCCG 
TCCCTCCCCC TGTCGTGGCA CTACCGGAGC GACCACGAGG ACCTCATCGC CTTCTCCAAC 
TACCGCTTCT ACCGTGGGGA GCTGTTCACC TTCCCGAGCG CCCAGCGGAC CGGCGCCGAC 
GTCGGCGTGG AGTCGTTCGT CGTCGACGGC ACCTACCGTC GCGGGACGAC CCGCGACAAC 
CCCGTGGAGG CCGCCGCGAT CGCGGACCGC GTCATCCTCC ACGCGACCCA GCACCCGGAG 
CTGTCGGTCG GGGTTGTGAC CTTCTCCGGG GCACAAGAGG ACGCGATCCT CGCTGAGCTC 
GAACGACGCT CCGTCGACCA CCCCGAGGTC TCCAGGCTCC TCAGCTCTCA CGACAGGCTC 
GACGGCTTCT TCGTCAAGAG CCTTGAGAAC GTCCAGGGAG ACGAACGAGA CATCATCCTG 
TTCTCGATCG GCTATGGCCC GGACGAGGCC GGGAAGATGA CGAACAACTT CGGCCCGCTC 
AACAAAGAAG GTGGCTGGAA ACGGCTCAAC GTGGCGATCA CCCGTGCGCG CAGGCGGGTC 
GAGGTCATCA GCTCGTTCCG GCCTGGGGCT ATCCAGTCGT CGAACGACAG CGTCGTCGCG 
CTCGCGCGCT ACCTAGACTT CGCTGACCGC GGCGTCCAGG CCCTCGCACT CGAGTCGGCA 
GAGAGCCTCG GCGAACCGGA GAGTCCTTTC GAGGAAGACG TGATCCGCGA GATCCAGGCC 
ATGGGATACG ACGTCGTCCC CCAGGTCGGC ACCGCCGGCT ACCGCATCGA CATCGGAGTG 
GTCCACCCGA CGGAACCTGG CCGTTTCATC CTCGCCGTAG AGTGCGACGG TGCTGCGTAC 
CACTCGTCGA AGGTCGCACG TGACCGTGAT CGCCTCCGCG AAGGTGTGCT CACCCGGCTC 
GGCTGGACCG TCTTCCGCAT CTGGGGCCTC AGCTGGGCAC GAGACCGACG GACCCAGGTC 
GAGCGGCTCC GGCGCGCGCT CGCCGAGGCC ACCGACGCGC GCGAGGCGCC TCGTCCCGTG 
CTGCTGGCGC GCGACGTCGT CCAGGTCGAG ATCGAGACCG TGGACCTCTC GGCTCCGCCC 
GCCTGGGCGG TCGCCTACGA GCCGGCCGAC GTGTGGCCGA GCTACGAGCA CGACCAGTGG 
CACGAGCCGG AGGCCAGGCC CGCTCTGCGG CGAGCCACCG AGGACTTCCT GAGCGTCGAG 
GCTCCGGTCC ACCGCGACCT GCTCGACGCG GCGCTGCGTC AGGTGATGGA CATCGGCCGC 
ATCGGCGCAC GGATCCGCAG CAACATCGAC GCGGCACTCG ACGCGGCGCG GGTCGACGGT 
GCGCGTGTCT CCACCGACGG CGCGGGCTTC ATCCGGGTCT CCGGGGCCGA GCTGCCCTCT 
CCCCGTGTGC CGGGTGCCGT AGGTCAGGCC CGCAAGATCC GGCACGTGCC TCCCGAGGAG 
CTCGACCTGG CAGTGGTGGG CCTCGTGCAG GACGCGATCG CCATCGAGGG TGACGACCTG 
AGACGAGCTG TCTCGCAGCT CTTCGGCTGG AACCTCACGG GCGAGGCTGT GTCCGCGATC 
GAGAGCGCCA CCTCGCGAGT GGTCCACAGG GGAGATGTCC TCCTCGCGGG CCGTTCGTAC 
CGAAAGCCAT GA 

 

Protein sequence

MTATTDLSTT AGERLAKQLD RWRRELITLD RRQRLLYFKH TKSASLEIEM TDPSHLTDLV 
SEGPVLIRPR PEQSTELVGH ADDSAAGRND DSSLHVVGKT ESELRSSLRR LDQVSQQTFA 
DRGTWTLYLT VGILEWEDPQ DRKPVLSPLL LLPVVLGRNG ADQPYTVRRT HDEALVNPVL 
RFKLEEDFGV ALPEVDPDDF EADDLLLDIQ KVVAQHGWTV HDRSVLTSFS FHKEAIYKDL 
QENEQAIGES GLVQVLALGP DAPSAGTFGF APPDDATLDD STPPETLHNI LDADGSQRKC 
IIAALDGKSF VMDGPPGTGK SQTIANMIAE LMANGRSVLF VSEKIAALDV VRNRLAQVSL 
DSFVLELHSA ATTRKHFSQV LGTALQNRVK APPALSAADL NALATTRGRL SGYAAAMNEL 
RPTFNRSIHW ALGQISPLDR LAHLRAPADR RWSQLSDKRL AEIEEHAGAL GRSWDPVTLG 
DRFMWRDVRV ASGTADPARL RREVVGAHDA AGQLASLCEA VDHDLQVRLG RTSEAAGIRG 
SLLSVLEARP ASADQAHLTA RDLDGVSRRA TVLREACSEH RAVIQELLST IGTGWIQLEP 
DGLEQLAGIT TPHDLWTVPS DLTASALAEA VDIAENLPLV IAEVLQDGRR LAAAFGVEPA 
SLSLRRTEDL AALADLTMES ALPESNWLNP VLAHAIEESQ RVLTGLVSIV VANRDRMAST 
FTPEVLELDL VGLKTRFAGP NTGFGRFSSQ ARADRKTLRG VSVRGKVDKV LLSSLDDAVA 
WQQSASQLDR GEGEHGARLG SYYQRTDTDF ERLGRALGVA QRAVQLAGDD LDPTVLGRQL 
STERVADPSI PSTARRLRSS QSSFAEGARR AFGDAAASRL SELPLTAVAD LLVDLTSRLR 
PRLTLLQEIA AVAGANLTVA SACTALERAG AASDAEAEVL NSYADDRLDL GAAYTGLDTD 
WDALESALEW AEKVRALVGT SVSPASADRF FSPTLASTDL APTLTRWVTA RDRLVSSFAP 
SRGTDLLADL DSDLDEASML LDDMVKTSTT EIDTWLRFTE SVDWLENNEL RELVDEMARE 
KTPSDQVALV VRRAVIEAWV DAVSAEDRRL SDYRPDDRDA LVSRFRELDE RLVSQSNGAV 
IAACNQRRPV SDSSRGAQVI RRQAELKSRH KAIRQVLTEA GDVAIALKPC FMMSPLAVSQ 
YLPSDMRFDV VIFDEASQVL PSDAINCIYR ARQLIVAGDQ KQLPPTSFFA SAASEEEDDD 
EALADFSSVL DLCKGSGGLP SLPLSWHYRS DHEDLIAFSN YRFYRGELFT FPSAQRTGAD 
VGVESFVVDG TYRRGTTRDN PVEAAAIADR VILHATQHPE LSVGVVTFSG AQEDAILAEL 
ERRSVDHPEV SRLLSSHDRL DGFFVKSLEN VQGDERDIIL FSIGYGPDEA GKMTNNFGPL 
NKEGGWKRLN VAITRARRRV EVISSFRPGA IQSSNDSVVA LARYLDFADR GVQALALESA 
ESLGEPESPF EEDVIREIQA MGYDVVPQVG TAGYRIDIGV VHPTEPGRFI LAVECDGAAY 
HSSKVARDRD RLREGVLTRL GWTVFRIWGL SWARDRRTQV ERLRRALAEA TDAREAPRPV 
LLARDVVQVE IETVDLSAPP AWAVAYEPAD VWPSYEHDQW HEPEARPALR RATEDFLSVE 
APVHRDLLDA ALRQVMDIGR IGARIRSNID AALDAARVDG ARVSTDGAGF IRVSGAELPS 
PRVPGAVGQA RKIRHVPPEE LDLAVVGLVQ DAIAIEGDDL RRAVSQLFGW NLTGEAVSAI 
ESATSRVVHR GDVLLAGRSY RKP