Gene Sked_23460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23460 
Symbol 
ID8633981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2613076 
End bp2613483 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content70% 
IMG OID 
Productpredicted nucleic-acid-binding protein implicated in transcription termination 
Protein accessionYP_003315095 
Protein GI269795640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.215318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0432341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTCGGC ACGCTAGACT GGACAGGTCT GGGTCACCAC GCCCGGCCTC CTCACGTGTC 
CCCGTACGGT CCGCTGAGCC CCAGAACCCC GGTTCTGAGC CGGTCGGCCC GGTGCGGACG
TGCGTCGGTT GCCGGCAGCG AGATGCCCAG TCGCAGATGA TCCGGTTCGT GATGAGCCGG
GGAGACGAGG ACGGCGCCAG CCCTGGCGTG GTCGCAGACC CCCGGCGCGT ACGGTCGGGA
CGCGGTGCCT GGCTGCACGA CGACGCCGGG TGCGCCGAGC GAGCGATCGC CCGGAAGGCG
TTCCAGCGTG CACTTCGCGT CCCGCACGAC ATCGCCATCA ACGGCTTGAC CATCCCGGTG
GACCCATGTC CTCCGGGAGC ACGACACGTC GACAAGGAAG CGGGTTAG
 
Protein sequence
MGRHARLDRS GSPRPASSRV PVRSAEPQNP GSEPVGPVRT CVGCRQRDAQ SQMIRFVMSR 
GDEDGASPGV VADPRRVRSG RGAWLHDDAG CAERAIARKA FQRALRVPHD IAINGLTIPV
DPCPPGARHV DKEAG