Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_23430 |
Symbol | |
ID | 8633978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2608477 |
End bp | 2609508 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_003315092 |
Protein GI | 269795637 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.902891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.190308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCACG AGACACCGAC CACCGGCCCC CGTGCGCGGG CAGACCGTCC GGTCCGCCCG CGCAGGCCCA CCGCGCCTGA CGGGCTCGTG CTCGTCGACA AGCCGGCGGG CTGGACGAGC CACGACGTCG TCGCGCGGAC CCGCGGACTG GCCGGGACCC GCAAGGTCGG CCACGCCGGG ACCCTCGACC CGATGGCGAC CGGGGTGCTG GTCCTCGGTG TCGGGCGCGC GACGCGGCTG CTGACGTACG TGGTCGGCAC CGACAAGGAG TACACCGCGA CGATCCGCCT CGGGCAGGCG ACCACCACGG ACGACGCCGA GGGCGAGATG CTGACCACCC CCGGTGCCGC GGGAGTCGCT GCCGACGCCG TCGCCGCAGG GATCGCCCGC CTCACCGGTG AGATCCAGCA GGTCCCGAGC TCGGTGAGCG CCATCAAGGT GGACGGCAAG CGCGCCTACG CGCTCGTCCG GTCGGGCGCC GACGTGGCCC TCGACGCCCG CACGGTGACG ATCAGCCGCT TCGACGTGCA CGCGGTGCGT GAGGTCGAGG TGACGGTCGA GGGCGACAGC GAGGCCGGGA CGGCCACCAC CACGACCACC GTGCTCGACG TCGACGTGAC CGTGGTCTGC TCGTCGGGCA CCTACATCCG TGCCCTGGCG CGTGACCTCG GGGCAGACCT GGGCGTCGGG GGCCACCTCA CCGCGCTGCG CCGGACGCGC GTCGGCGGGT ACACGCTCGA CGCGGCCAGG TCGTTCGAGG AGCTGGAGTC CCAGGCCGAC GCCGACGGCA CGCTGGCGAC CCTCCCGCTG GCCGACGCGG CCCGGGGGAC CTTCCCGGTG CGGGTGCTCA CGGCCGAGGA GGTCGTCGCG CTCTCGTACG GGCAGTGGCT CGAGCCGACC GGCGCCTCCG GGACGACCGC GGCGCTCTCG CCCGAGGACG AGCTCGTCGC CCTCGTCGAG GACGTCACGC GCAGCGGCCA CGTCAAGGCG AAGCCGGTCA TCGTCTTCGC GCCGTCCCAG GCGTCCACCT AG
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Protein sequence | MTHETPTTGP RARADRPVRP RRPTAPDGLV LVDKPAGWTS HDVVARTRGL AGTRKVGHAG TLDPMATGVL VLGVGRATRL LTYVVGTDKE YTATIRLGQA TTTDDAEGEM LTTPGAAGVA ADAVAAGIAR LTGEIQQVPS SVSAIKVDGK RAYALVRSGA DVALDARTVT ISRFDVHAVR EVEVTVEGDS EAGTATTTTT VLDVDVTVVC SSGTYIRALA RDLGADLGVG GHLTALRRTR VGGYTLDAAR SFEELESQAD ADGTLATLPL ADAARGTFPV RVLTAEEVVA LSYGQWLEPT GASGTTAALS PEDELVALVE DVTRSGHVKA KPVIVFAPSQ AST
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