Gene Sked_23380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23380 
Symbol 
ID8633973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2602168 
End bp2604375 
Gene Length2208 bp 
Protein Length735 aa 
Translation table11 
GC content69% 
IMG OID 
Productguanosine pentaphosphate synthetase I/polynucleotide phosphorylase 
Protein accessionYP_003315087 
Protein GI269795632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0262857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGGTC CCGAGATCGA GTTCGAAGAA GCAGTCATCG ACAACGGGCG CTTCGGCACC 
CGCACCGTCC GTTTCGAGAC GGGCCGCCTG GCCCGCCAGG CAGCCGGCTC GGCCGCCGCG
TACCTCGACG GCGAGACGAT GCTGCTGTCG GCCACCACGG TCGGCAAGCA CCCCAAGGAC
CAGTTCGACT TCTTCCCGCT GACGGTCGAC GTCGAAGAGC GCATGTACGC CGCGGGACGC
ATCCCCGGCT CGTTCTTCCG CCGCGAGGGT CGCCCCAGCA CGGAGGCCAT CCTCACGTGC
CGCCTCATCG ACCGCCCGCT CCGCCCGACC TTCGTCAAGG GCCTGCGCAA CGAGGTCCAG
GTTGTCGTGA CCGTCCTCGC CGCACACCCT GACGACGCGT ACGACACCCT CGCGATCAAC
GTCGCGTCGC TGTCCACCCA GCTCTCCGGC CTGCCGTTCT CCGGCCCGGT CGGCGCGGTG
CGCATCGCCC TCGTCGACGG CCAGTGGGTC GCGTTCCCCA AGTACTCCGA CAAGGAGAAG
GCCGTCTTCG ACATGGTCGT CGCCGGTCGT GTCGCCGGGG ACGACGTCGC GATCATGATG
GTCGAGGCCG AGGCCACCGA CAACTCCTGG ACCCTCATCA AGGACGAGGG CGTCGCCGCC
CCGACCGAGG AGGTCGTGGC CGAGGGCCTC GAGGCCTCGA AGGTCTTCAT CCGTCAGCTC
TGCGAGGCGC AGGCCGCGCT CGCCGCCCGC GCTGCCAAGC CGGTCCGCGA GTTCCCGCTG
TTCCTCGACT ACCAGGACGA CGCCTACGCC GCGATCGAGG CGCAGGTCGC CACGCCGCTC
GGCCAGGCGC TCACCATCGC GGACAAGCAG GACCGCGAGA ACCGCCTCGA CGAGATCAAG
GCAGAGGCCC TCGAGGCCCT CGCCGGTCAG TTCGAGGGGC GCGAGAAGGA ACTGTCCGCA
GCCGTCCGCT CCGTCACCAA GAAGCTCATC CGCCAGCGCG TCCTCACCGA CGGCGTCCGG
ATCGACGGTC GTGGGCTCGC GGACATCCGC ACCCTCTCGG CCGAGGTCGA GGTCGTCCCC
CGCGTGCACG GCTCCGCGAT CTTCGAGCGT GGCGAGACCC AGATCATGGG CATCACCACC
CTCAACATGC TCCGCATGGA GCAGCAGATC GACTCGCTCG GCCCGGAGAC GCGCAAGCGC
TACATGCACA ACTACAACTT CCCGCCGTAC TCGACCGGTG AGACCGGCCG TGTGGGAAGC
CCCAAGCGTC GTGAGATCGG GCACGGTGCC CTCGCCGAGC GCGCCCTCGT CCCCGTCCTG
CCGACCCGCG AGGAGTTCCC CTACGCGATC CGTCAGGTCT CCGAGGCGCT CAGCTCCAAC
GGGTCCACCT CGATGGGCTC CGTCTGCGCC TCGACCCTCT CGCTGCTCAA CGCCGGTGTG
CCGCTGCGCG CCCCGGTCGC CGGCATCGCG ATGGGCCTCA TCTCCGACAC GGTCGACGGG
AAGCCCCGCT ACGCGGCGCT CACCGACATC CTCGGAGCCG AGGACGCCTT CGGCGACATG
GACTTCAAGG TCGCCGGTAC CCGTGAGTTC GTCACGGCCA TCCAGCTCGA CACGAAGCTC
GACGGCATCC CCGCGTCGGT CCTCGGCGGC GCGCTGACCC AGGCCCGCGA CGCCCGCTTC
GCCATCCTCG ACGTGCTCGG CGAGGCCATC GACGTGCCCG ACGAGATGAG CCCGCACGCT
CCTCGCGTCA TCGCGGTCAA GGTCCCCGTG GACAAGATCG GCGAGGTCAT CGGCCCGAAG
GGCAAGATGA TCAACCAGAT CCAGGAGGAG ACGGGCGCGG ACATCTCCAT CGAGGACGAC
GGCACCGTGT ACATCGGTGC CACCGACGGC CCCTCCGCAG AGGCCGCCCG CGCAGCGATC
AACGCGATCG CCAACCCCCA CGTGCCCGAG GTGGGCGAGC GCTTCGTCGG GACGGTCGTC
AAGATCGCTC CCTTCGGTGC CTTCATCTCC CTCTCGCCGG GCAAGGACGG GCTGCTGCAC
ATCAGCCAGA TCCGCAAGCT CGTCGGTGGC AAGCGCGTGG AGAACGTCGA GGACGTCCTG
TCCATCGGCC AGAAGGTCCA GGTCGAGATC GGCGAGGTCG ACCCGCGCGG CAAGCTGTCG
CTGCACGCCG TGGTCGACGA GGCCGAGGCT GGGCAGGCTG ACACCTGA
 
Protein sequence
MEGPEIEFEE AVIDNGRFGT RTVRFETGRL ARQAAGSAAA YLDGETMLLS ATTVGKHPKD 
QFDFFPLTVD VEERMYAAGR IPGSFFRREG RPSTEAILTC RLIDRPLRPT FVKGLRNEVQ
VVVTVLAAHP DDAYDTLAIN VASLSTQLSG LPFSGPVGAV RIALVDGQWV AFPKYSDKEK
AVFDMVVAGR VAGDDVAIMM VEAEATDNSW TLIKDEGVAA PTEEVVAEGL EASKVFIRQL
CEAQAALAAR AAKPVREFPL FLDYQDDAYA AIEAQVATPL GQALTIADKQ DRENRLDEIK
AEALEALAGQ FEGREKELSA AVRSVTKKLI RQRVLTDGVR IDGRGLADIR TLSAEVEVVP
RVHGSAIFER GETQIMGITT LNMLRMEQQI DSLGPETRKR YMHNYNFPPY STGETGRVGS
PKRREIGHGA LAERALVPVL PTREEFPYAI RQVSEALSSN GSTSMGSVCA STLSLLNAGV
PLRAPVAGIA MGLISDTVDG KPRYAALTDI LGAEDAFGDM DFKVAGTREF VTAIQLDTKL
DGIPASVLGG ALTQARDARF AILDVLGEAI DVPDEMSPHA PRVIAVKVPV DKIGEVIGPK
GKMINQIQEE TGADISIEDD GTVYIGATDG PSAEAARAAI NAIANPHVPE VGERFVGTVV
KIAPFGAFIS LSPGKDGLLH ISQIRKLVGG KRVENVEDVL SIGQKVQVEI GEVDPRGKLS
LHAVVDEAEA GQADT