| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_23220 |
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| Symbol | |
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| ID | 8633957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 2582491 |
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| End bp | 2587440 |
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| Gene Length | 4950 bp |
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| Protein Length | 1649 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | ATP dependent helicase, Lhr family |
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| Protein accession | YP_003315071 |
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| Protein GI | 269795616 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.408844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0469013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCACAG GACAGCAGGA CGACACCGCG GCGCGGGCCG CCCGCGACAT CGCGCACGAC
CCGGACGCCC GGCGCCCTGC GCTCGAGCGC TTCAGCCCGG CGACCCAGGC GTGGTTCGCC
GGGGCCTTCC ACGCCCCCAC GGCGGCGCAG ACCGGCACCT GGGACGCCGT CGCGGACGGC
CACCACGCGC TCGTCGTCGC GCCGACCGGG TCGGGCAAGA CCCTCGCGGC CTTCCTCTGG
GCCCTCGACG GCCTGCTCGA CCCCTCCGGC CCCGAGCCCG AGCCACCGGC CCGCTGCCGG
GTCGTGTACG TCTCGCCCCT CAAGGCGCTC GCCGCTGACG TCGAGCGGAA CCTGCGCTCC
CCGCTCGCCG GTGTGCGGCA GTCGGCCGCT CGCCGCGGGG AGGCCATCCG GGAGGTACGC
GTCGGCACCC GTACCGGTGA CACCCCGGCG AGCGAGCGTC GCGCCTTCGC GACCACCCCG
CCGGACATCC TCATCACGAC GCCGGAGTCG CTGTTCCTCA TCCTCACCTC GGGCGCCCGG
GAAGGGCTCC GCGGTGTCAC CACGGTGATC CTCGACGAGA TCCACGCGGT CGCGGGGACC
AAGCGCGGGG CCCACCTGGC GGTCTCGCTC GAACGTCTCG ACGCCCTCGT CGAGACGCCC
GTCCAGCGCA TCGGGCTGTC GGCCACCGTG ACTCCGGTCT CCTCCGTCGC GGCCTTCCTG
GCCGGCAGCA GGACGCCCGC AGACGGCGGA CGCACCGTCG ACGTGGTCCA GCCGCCCGCG
TCGAAGACCA TCGAGGTCGA CGTGGTCGTG CCGGTGCCCG ACCTCGCCGA CCTGCGCTCG
GCGCCGACCG CCGGCGCCAC CGACGGCCCG CAGGCTCAGG GAGCACCGGC ACCGGGGACG
CAGCCTCCGG GCGCCGGAGG GCCCGCCACC CTCGCACCCG GCGTGCCCGA CCTCTCGGGG
GCGGCTGCCG GACCCCGCGC CCGGCCGTCC GTCTGGCCGC ACATCGAGGA GCGGGTGGTC
GACCTGGTCG CCGCCCACCG TTCGACGCTC GTCTTCACGA ACTCGCGCCG GGGCGCGGAG
CGGCTCACCT CTCGCATGAA CGAGGTGTGG GCCGAGCGCG AGGGTGCCGA CCACACCGAC
CCGGGCGAGG CGCACCCGGC GCTCGTGCAG GGCCAGTCCG GCGCCTCGAC GGGGGCGCCC
GGCGTGCTCG CCCGCGCCCA CCACGGGTCG ATGAGCCGTG CCGAGCGCAC CCACACCGAG
ACCGAGCTCA AGGAGGGACG GCTGCCCGCC GTGGTCTCGA CCTCGTCGCT CGAGCTCGGC
ATCGACATGG GCGCGATCGA CCTCGTGGTG CAGATCGGCT CGCCGCCGTC GGTCGCGAGC
GGCCTCCAGC GGATCGGCCG CGCCGGCCAC CAGGTCGGGG CTGTCTCCCA CGGGGTCGTC
TTCCCGATGC ACCGCGGAGA CCTGGTCCCG TCGACCGTCA TCGCCGAGCG GATGCGGACC
GGGAGCATCG AGCCCGTCCA CGTCATGCGC AACCCGCTCG ACGTGCTGGC CCAGCAGGTC
GTCGCCATGG TCGCGACCGA GGACTGGCAC ATCGAGGAGC TCGCGACCGT CCTCCGGCGC
GCCGACCCGT ACACCACCCT CGGGGACCGC ACGCTGCGCG CCGTGCTGGA CATGCTCGCC
GGTCGCTACC CGAGCGAGGA CTTCGGTGAG CTCCGCGCGC GCATCGTGTG GGACCGGGTG
ACCGACACGC TCTCCGCACG CCCCGGCGCG CTGCGCCTGG CGGTCACCAG CGGAGGCACC
ATCCCGGACC GTGGTCTCTA CGGGGTCTTC CTCGCGACGG GCGCGAGCGG CGCCACGGGC
GACTCCGGGA GCCCGAGAGG CGGGAAGCGC GTCGGCGAGC TCGACGAGGA GATGGTCTAC
GAGTCCCGGG TCGGCGACAC CTTCACCCTC GGGTCGAGCA CGTGGCGGAT CGAGGACATC
ACCCCCGACC AGGTGCTCGT GAGCCCTGCC CCGGGCGTGC CCGGGCGGCT GCCCTTCTGG
AAGGGCGACT CCCCCGGGCG CCCCGCCGAG CTCGGGCGGG CGATCGGCGC CTGGGTCCGC
GAGGCGAGCC AGCAGGCCGG CACAGCAGGC ACAGGCTCCA GCACTCCCTG GGCGGGGCTC
GACCCCTGGG CCACCGACAA CCTCCGGGCT TACCTCGACG AGCAGCGCGA GGCCACCGGC
GTCGTCCCCG ACGACAAGAC CCTCCTGGTC GAGAGGTTCC GTGACGAGCT CGGCGACTGG
CGCGTGGTGA TCCACTCCCC CTACGGCGCC AAGGTCCACG CGCCGTGGGC TCTCGTGCTC
GCCGCGCGCA TCCGGGAGCG CTTCGGCATC GACGCCGCCG CGATGCACTC CGACGACGGC
ATCGTGCTGC GCATGCCCGA CGTCTCGGAC CCCTTCGCCG AGCTGCCAGA CGGGACGAGC
ACCGACGCCT CGCGCGACCA GGTCGACCTG GCCGAGCTGC TGCTCGACCC CGAGGCGGTC
GAGACCGCGG TGCGGTCCGA GCTCAGCGGG TCCAACCTCT TCGGGGCACG CTTCCGGGAG
GCCGCGGCCC GCGCCCTGCT GCTCCCCCGC CGACGTCCCG ACCGTCGCCA GCCGCTGTGG
CAGCAGCGTC ACCGCTCGGC CCAGCTGCTG AGCGTCGCGT CCGGGTTCCC CGACTTCCCG
ATCGTCCTCG AGGCCGTCCG GGAGTGCCTC CAGGACGACT TCGACGTCGC GTCGCTCGTC
TCCCTCATGA AGGACGTCGA GGACGGGCGG GTCCAGGTCG TCGAGGTCAC GACCCGCACC
CCGTCGCCCT TCGCCCAGTC CCTGCTGTTC GGGTACACGG CGCAGTTCCT CTACGACGGG
GACGCGCCGC TCGCCGAGCG CCGCGCTGCC GCGCTGACCC TCGACCCGGA CCTGCTGGCC
GAGCTCCTCG GCAGCGACGG CAGCTCGCAG ATCGCCGACC TCCTCGACCC CGACGCCGTG
GTGCGGACCG AGCAGGAGCT GTCCGGCCTG GCTCCCGAGC GGCACGCCCG GCACGCGGAG
GACCTCTGGG ACCTGCTGCG CAGGACCGGA CCGCTCACCA CGGCGGAGGT TGTCGAGCGG
ACCCGCGAGG ACGTCCGCGG CGAGGCCGAG CAGTGGCTCG ACGCGCTCGC CGCCAGCCGC
CGGGTCGTCC AGGTGCGCAT CGCCGGCGTC GAGCCCGCAG AGCGGTGGGC CGTCGCCGAG
GACGCCGGGC GTCTGCGGGA CGCGCTCGGA GTCGCGCTGC CCGTGGGGCT GCCGGAGAGC
GTCACGGAGC TGGTGCCCGA CCCGCTCGGC GACCTCGTCC GCCGGTACTC GCGCACCCAC
GGCCCCTTCG CCGCCCGGGA CCTCGCCGGC CGCTACGGGC TCGGCGTCGC CGTGGTCGCG
GACGTGCTGC GTCGCCACGT GCAGGCCGGG CAGCTGGTCA CGGGCAGGCT GCGGCCGGAC
GTCCTCGGCG GGACGGGCGA GGACTACTGC GACGCCGACG TGCTGCGGAC GCTGCGTCGT
CGGTCCCTGG CCGCGCTGCG CGCCGAGGTC GAGCCCGTCC AGCACCCGGC GCTCGGGGTG
TTCTTGCCCC GGTGGCAGTC GGTGGGCGGT CTCCGCGGGG TCGACGGGCT CTACCGGGTG
GTCGAGCAGC TCTCGGGCGC CCCGGTACCG GTCTCCGCGC TCGAGTCGCA GATCCTCCCG
GCGCGCGTGG TCGACTACCG GCCCTCGATG CTCGACGAGC TGACGACGTC GGGCGAGGTC
CTCTGGTGCG GGCACCACGA GCTCCCGGGC GGGCGCGGCG CGGCGGACGC CATGATCAGC
CTGCACCTCG CCGACTCGGC GCACCTGACC CTGCGCCCAG TCGAGGCGGA CGACGCCCCG
CTCACCGACC TGCAGGCGGC GGTCCTCGGG CTGCTCGAGG CCTCGGGAGG GTTCTTCTAC
CCACGGCTCG CGTCCTCGCT CGAGCACCCC GGCCCCGAGG TCCTCGCTGC GCTGTGGGAG
CTCGTCTGGT CCGGCCACGT CACCAACGAC ACCCTGGGCC CCCTCCGTGG ACGGCTCAGC
GGCCGTCGCG CGACGAGCCG GTCGAGCCCG GCCGCGAGAC CGCGCCCCCT GAGCCGCCGA
CCCCGCTTCT CCTCTCTCGG TGCGACCGCG AGCTCGATCC GAGAGGCTGC CGCAGACCCG
TCGGGCGGCG GCCGGTGGTC GGCGCTGCCG GTCCGCGACG TCGACACCAC CCGGCGCGCG
CACGCGCTCG CCACGGTCCT GCTCGACCGG CACGGCGTGC TCACCCGCGC GGTCACCGGC
GCCGAGCAGG TCACCTCCGA GTACCGCGGG GTCTACAAGG TCCTCGGCGC GCTCGAGACG
GCGGGCCAGG TGCGTCGCGG GTACTTCGTG GAGCACCTCG GTGGCTCGCA GTTCGCCCTG
CCTGGCGCGG TGGACCAGCT GCGCACCGCG GAGAACGACA GGGTCCGGGA GGCCGAGCGG
ACCGACCCGC CGACGGCGCT GTGCCTCGCC GCGACCGACC CCGCCCAGCC GTACGGGGCG
GCGCTGGCGT GGCCGCCCTC CCCCGGCGCG GAGGAGGCGG GGCGCTCGGG TCACCGTCCC
GGCCGGAAGG CCGGTGCGCA CGTGGTCGTG GTCCGTGGAG AGCTCGTCCT CTACCTCGAG
CGCGGCGGGC GCAGCCTCCT GACGTTCTCC GACGACCAGA CGCTCCTCGA GCCTGCGACC
CGTGCACTGG CGCTGTCCGT GGCGGACGGC CGCCTCGGCA AGGTCACGCT GCGCCGGGTC
GACGGGGACG AGTCGCTGAC CGTGGCCGGT GCCAGCCGCA CCGCCGGGGT CGCCGCGCTG
GTCGCAGCAG GCTTCGGTCC GACACCCTCC GGGCTCCGGC TCTCCGGTCT CCCGGCAGGT
CGCCGGTCCG CGGGCGGTGC CCGTGCCTGA
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| Protein sequence | MATGQQDDTA ARAARDIAHD PDARRPALER FSPATQAWFA GAFHAPTAAQ TGTWDAVADG
HHALVVAPTG SGKTLAAFLW ALDGLLDPSG PEPEPPARCR VVYVSPLKAL AADVERNLRS
PLAGVRQSAA RRGEAIREVR VGTRTGDTPA SERRAFATTP PDILITTPES LFLILTSGAR
EGLRGVTTVI LDEIHAVAGT KRGAHLAVSL ERLDALVETP VQRIGLSATV TPVSSVAAFL
AGSRTPADGG RTVDVVQPPA SKTIEVDVVV PVPDLADLRS APTAGATDGP QAQGAPAPGT
QPPGAGGPAT LAPGVPDLSG AAAGPRARPS VWPHIEERVV DLVAAHRSTL VFTNSRRGAE
RLTSRMNEVW AEREGADHTD PGEAHPALVQ GQSGASTGAP GVLARAHHGS MSRAERTHTE
TELKEGRLPA VVSTSSLELG IDMGAIDLVV QIGSPPSVAS GLQRIGRAGH QVGAVSHGVV
FPMHRGDLVP STVIAERMRT GSIEPVHVMR NPLDVLAQQV VAMVATEDWH IEELATVLRR
ADPYTTLGDR TLRAVLDMLA GRYPSEDFGE LRARIVWDRV TDTLSARPGA LRLAVTSGGT
IPDRGLYGVF LATGASGATG DSGSPRGGKR VGELDEEMVY ESRVGDTFTL GSSTWRIEDI
TPDQVLVSPA PGVPGRLPFW KGDSPGRPAE LGRAIGAWVR EASQQAGTAG TGSSTPWAGL
DPWATDNLRA YLDEQREATG VVPDDKTLLV ERFRDELGDW RVVIHSPYGA KVHAPWALVL
AARIRERFGI DAAAMHSDDG IVLRMPDVSD PFAELPDGTS TDASRDQVDL AELLLDPEAV
ETAVRSELSG SNLFGARFRE AAARALLLPR RRPDRRQPLW QQRHRSAQLL SVASGFPDFP
IVLEAVRECL QDDFDVASLV SLMKDVEDGR VQVVEVTTRT PSPFAQSLLF GYTAQFLYDG
DAPLAERRAA ALTLDPDLLA ELLGSDGSSQ IADLLDPDAV VRTEQELSGL APERHARHAE
DLWDLLRRTG PLTTAEVVER TREDVRGEAE QWLDALAASR RVVQVRIAGV EPAERWAVAE
DAGRLRDALG VALPVGLPES VTELVPDPLG DLVRRYSRTH GPFAARDLAG RYGLGVAVVA
DVLRRHVQAG QLVTGRLRPD VLGGTGEDYC DADVLRTLRR RSLAALRAEV EPVQHPALGV
FLPRWQSVGG LRGVDGLYRV VEQLSGAPVP VSALESQILP ARVVDYRPSM LDELTTSGEV
LWCGHHELPG GRGAADAMIS LHLADSAHLT LRPVEADDAP LTDLQAAVLG LLEASGGFFY
PRLASSLEHP GPEVLAALWE LVWSGHVTND TLGPLRGRLS GRRATSRSSP AARPRPLSRR
PRFSSLGATA SSIREAAADP SGGGRWSALP VRDVDTTRRA HALATVLLDR HGVLTRAVTG
AEQVTSEYRG VYKVLGALET AGQVRRGYFV EHLGGSQFAL PGAVDQLRTA ENDRVREAER
TDPPTALCLA ATDPAQPYGA ALAWPPSPGA EEAGRSGHRP GRKAGAHVVV VRGELVLYLE
RGGRSLLTFS DDQTLLEPAT RALALSVADG RLGKVTLRRV DGDESLTVAG ASRTAGVAAL
VAAGFGPTPS GLRLSGLPAG RRSAGGARA
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