Gene Sked_23100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23100 
Symbol 
ID8633945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2569287 
End bp2570261 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content75% 
IMG OID 
ProducttRNA isopentenyltransferase MiaA 
Protein accessionYP_003315059 
Protein GI269795604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.11506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGATCG TTGCAGTGGT GGGCCCCACG GCCACCGGGA AGTCCGACCT CGCGCTCGAC 
CTGGCCGAGG CCCTCGCCGC CTCCGGTGGG GAGGTCTCCC CACCGGAGAT CGTCAACGCC
GACGCGTACC AGCTCTACCG CGGCATGGAC ATCGGCACCG CTAAGGTGCC GGTCGCAGAC
CGTCGCGGTG TGGTGCACCA CCAGCTCGAC GTCCTCGACG TCCAGGACGA CGCCTCGGTC
GCCGCCTACC AGGCGCAGGC CCGCGCAGAC CTCGCCGCGA TCACCGGCCG CGGCGCGCGG
CCCCTCGTGG TCGGCGGCTC GGGGCTGTAC CTCCGTGCGC TCCTCGACGA CATGACGTTC
CCCGGGACCG ACCCGCAGGT CCGCGCCGCC CTCGAGGCGC GCGCCGAGGC CGAGGGGACC
CGACGCCTCT ACGAGGAGCT CGCCGCCCGG GACCCGGCTG CCGCCGCGGC CGTCGAGCCG
CGGAACACCC GACGCATCGT CCGGGCGCTC GAGGTCATCG AGCTGACCGG TGCGCCCTTC
TCGGCGAACC TGCCACGCCA GGAGTACGTG CGACCGGCCG TCCAGATCGG CCTCGACGTC
GACCGGGCCC TGCTCGACGA GCGCGCGCAG GCCCGCGTCG ACGCCATGTG GGAGCGAGGG
CTCGTCGACG AGGTCGTCGC GCTCGCGGAG CGCGGCCTGG GGACGACCGC GTCCCGCGCC
GTCGGGTACG CCGAGGTCCT CCGGCACCTC GCGGGCGAGA CCACGCTCGA GCAGGCACGC
ACCGACATCG TCGCGAACAC CCGGCGCCTC GCGCGCAAGC AGATGGGATG GTTCGGGCGC
GACCCCCGGG TGCACTGGCT GCGGACCGAG TCGCCCACCC TCCTCGCCGA CGCCCTGGCG
ATCGTCGAGG CGGCCGACCG CGGTACGCCA CCGCCGTCTG CCGACGGACC CGTGAGCCGT
AGTCTGGGGT CATGA
 
Protein sequence
MLIVAVVGPT ATGKSDLALD LAEALAASGG EVSPPEIVNA DAYQLYRGMD IGTAKVPVAD 
RRGVVHHQLD VLDVQDDASV AAYQAQARAD LAAITGRGAR PLVVGGSGLY LRALLDDMTF
PGTDPQVRAA LEARAEAEGT RRLYEELAAR DPAAAAAVEP RNTRRIVRAL EVIELTGAPF
SANLPRQEYV RPAVQIGLDV DRALLDERAQ ARVDAMWERG LVDEVVALAE RGLGTTASRA
VGYAEVLRHL AGETTLEQAR TDIVANTRRL ARKQMGWFGR DPRVHWLRTE SPTLLADALA
IVEAADRGTP PPSADGPVSR SLGS