| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_22960 |
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| Symbol | |
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| ID | 8633931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 2551825 |
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| End bp | 2553483 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| Protein accession | YP_003315045 |
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| Protein GI | 269795590 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.282071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAG GCACCTCTCC CGCAGGGGCG ACCCTGCGGC GCCAGCTCGG GCTCACCGTC
GTGGGAGCCG GGACCGTGCT GCTGCTCATC GTGGTGTACG CGGTGTACGC ACTGCTCCAG
GTGGTGCACT ACCAGAATCG CGTGACCGAC ATCTACGTCA CCGCCGTCTC GTACTCGGAC
GGCCTGTCCA CGCGGATCGT GGACATCGGC TCGGCGGTGG ACGCGTACCT CGACTCGGGT
GTCGAGTCCG CGCTCGGGTC GTACCGCGAC CCGGACACCA CGGCCGCGCG GCAGATCCGT
TCTGAGTTCC TCGAGGACTA CGGCCCGGGC TCCGAGGTCG TCGCCGCCCT CGACCGGACC
CTCGGCCTCG TCTCGACCTG GCGGACGCAG TTCGCGACCC CGGCGGTCGC GCAGGTGTCC
GTGGAGGGCC CCGGCACGGT GAGCGAGGCG ACGGTGGAGC GCGGCGAGGC CATGCTCCTC
GACGCCCGCG ACGCGGCGCT CGAGCTCGGC ACGGTCATCG AGACCGGCCG CGAGGACGCG
TCCGACCGGC TCGCCTCGTG GACACGCAAC CTGTTCCTCG CCGTCGTCGT GCTCACCGTC
GCAGCCGTCG TGGTCGGGTT CGGCACCTGG CGCACCCTGC GCCGCAGCGT GCTCGAGCCG
CTCGCCGACC TCGCGGCCAA GGCGGAGTCG GTGAGCGCGG GCGAGCTCGA CCTGCCCGTG
CGCACCGACG GCCCGGGGGA GATCGCCTCG CTCGCGCACG CGGTCGACGC GATGCGTGTC
GAGCTCGTGG CCCGCATGGC CTCGGAGACA CGCTCGCGCG CGGAGATCGC GGAGGCGCAC
GAGCAGGTCG TCGAGCAGGC CGAAGAGCTG CGCCGGTCCA ACCGCGACCT CGAGCAGTTC
GCCTACGTCG CCTCGCACGA CCTGCAGGAG CCGCTGCGCA AGGTCGCGAG CTTCACGCAG
CTCCTGCAGA AGCGCTACGG CGGCGAGCTC GACGAGCGTG CCGACCAGTA CATCGAGTTC
GCCGTCGACG GCGCCAAGCG GATGCAGCGT CTCATCCAGG ACCTGCTGGG CTTCTCGCGG
GTCGGCCGGT CGACCGGCGA CGACGTCGAG GTCGACCTCG CGGAGGCGTG CGCGACGGCT
GTCGCGACCC TCGACGCGGC GGTCGAGGAG TCGGGTGCGA CCGTCGAGGT CGGCGAGCTC
CCGGTGGTCC TGGGACAGCA GACGCTCCTG GTCCAGCTGT TCCAGAACCT CGTGGGCAAC
GCGGTCAAGT TCCGGCACCC CGACAGGGCG CCGCACGTGT CCGTCGGCGC CGTTCGCCGC
GACCAGGGCT GGGAGCTGTG GTGCTCGGAC AACGGGATCG GGATCGACCA GCAGTACGCC
GACCGGGTCT TCGTCATCTT CCAGCGCCTG CACGCCAAGG ACGCCTACGA GGGCACGGGC
ATCGGCCTGG CGCTGTGCAA GAAGATCGTC GAGTTCCACG GCGGCGAGAT CTGGCTCGAC
ACCGAGGTCG CCGAGGGCAC GACGGTCCGC TGGACCCTGC CGGACCCCCG CGAGGTAGGC
TCTGCGGGGC CCGAGGCTGA CGCCGAGGGA GAGCACGAGG ACGCGGGGGC GGTCAGGACC
GCGCCCGCCC CACGACAGCA CGACGAGGAG AACGCATGA
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| Protein sequence | MARGTSPAGA TLRRQLGLTV VGAGTVLLLI VVYAVYALLQ VVHYQNRVTD IYVTAVSYSD
GLSTRIVDIG SAVDAYLDSG VESALGSYRD PDTTAARQIR SEFLEDYGPG SEVVAALDRT
LGLVSTWRTQ FATPAVAQVS VEGPGTVSEA TVERGEAMLL DARDAALELG TVIETGREDA
SDRLASWTRN LFLAVVVLTV AAVVVGFGTW RTLRRSVLEP LADLAAKAES VSAGELDLPV
RTDGPGEIAS LAHAVDAMRV ELVARMASET RSRAEIAEAH EQVVEQAEEL RRSNRDLEQF
AYVASHDLQE PLRKVASFTQ LLQKRYGGEL DERADQYIEF AVDGAKRMQR LIQDLLGFSR
VGRSTGDDVE VDLAEACATA VATLDAAVEE SGATVEVGEL PVVLGQQTLL VQLFQNLVGN
AVKFRHPDRA PHVSVGAVRR DQGWELWCSD NGIGIDQQYA DRVFVIFQRL HAKDAYEGTG
IGLALCKKIV EFHGGEIWLD TEVAEGTTVR WTLPDPREVG SAGPEADAEG EHEDAGAVRT
APAPRQHDEE NA
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