| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_22850 |
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| Symbol | |
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| ID | 8633920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 2540349 |
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| End bp | 2541956 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_003315034 |
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| Protein GI | 269795579 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0536837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCAC CCCACGGGTC GCTGCGCCCT GCCTCCGTGC AGCCGAGGTC GCTCGGCGAC
CTCGCCGACA CCGTCGCGGT GACCGTCGAC CCGGCGGCTC GGGGCGTCCT CGTCTCCGGC
GTTGTCCTCG GCAGCGCTGA CGTGCAGCCC GGCGACCTCT TCGTGGCGGT CCCCGGAGCA
CGCTCGCACG GCGCACGCTT CACCGCCGCG GCGGTCGCCG CCGGTGCGGT CGCGGTGCTC
ACGGACACCG AGGGTCTCGC CCTGCTCGAG TCGACCGACG AGGGTCTGGC TCTCGTCCAC
GGCACACCCG TCGTGCTGCT GCCCCAGGGC AGCGACCCGC AGCGCGCCGC AGGCTCCGCA
GCATCGTGGT TCTACGACCA CCCGTCGGCT GCGCTGACCA GCTTCGGCGT CACGGGGACC
AACGGGAAGA CCACCACCAC CTACCTGCTC GACCACCTGC TCACCGCCCT CGGCCGGACC
GTCGGGCTGG TCGGTACCGT CGAGACCCGG TCGGGTGCAC GCGTGCTCCC CAGCCGCCTG
ACGACCCCCG ACGCCGCGAC CCTGCAGGGC GTGCTCGCGA CCATGCGCGA GGACGGCGTC
GACGTCCTCG CGATGGAGGT CTCCTCGCAC TCGATCAGCC AGCGGCGCAT CGACGGCCTG
CACTTCGACG TCGCCGGCTT CACCAACCTC AGCCAGGACC ACCTGGACTT CCACGGCGAC
CTCGACCGCT ACTTCGCGGC CAAGGCCGAG CTGTTCACCG CAGAGCGCGC CCGGCGCGGC
GTGGTGGTCG TCGACGACGA GTGGGGCCGT CGCCTCGCTG CCACCGCTGA CATCCCCACG
GTCACGCTGA GCGTCGAGCA CAGCGGTGGC CCGCAGAGCG ACTGGACGGT GCGGGACGTG
CACGCCGGGG CCTCGGGCTC CACGTTCTCC GTCGTGCACC GGGACGGGCG CAGCGTCCGG
GCGCGGACGG CCCTCCCGGG CTCCTTCAAC GTCGCCAACG CCGCCCTCGC GATCGTCATG
GTCGTCGAGT CGGGCATCGA GGTGGGGACC GTCACAGCCG CTCTGGAGGC TGCCGGCGGT
CTCTCTCCCG CGGTTCCTGG CAGGATGGAG CAGGTCTCCG ACAGCCCCCG GGTGGTCGTC
GACTTCGCGC ACAACCCCGA CGCCCTCGCC CTCGCTCTCG CGGCCCTCCG GCCGACGACC
GCGGGACGGC TGGTCGTCGT GTTCGGGGCC ACGGGCGAGC GCGACACCAC CAAGCGTCCG
GTCATGGGCA GGATCGCGGT CGAGGGGGCC GACGTGGTCG TCGTGACCGA CGACGACCCG
CACGGCGAGG CTGCCGACGG CATCCGTGCC GAGGTGCTCG CAGGAGCACG GGAGGCCGCC
GCACAGCCAG GCTGCGACGT CGACGTGCTC GAGGCCGCGC CGCGGGCGCT CGCGATCCGG
GCGGCGGTCC TCGCCGCGGA CGACGAGGAC ACGGTCCTGG TCGCCGGGCG TGGGCACGAG
GTCTGGCAGG AGATCGACGG GGTGGACCAC CCGCTCGACG ACAGGGTGGA AGCACGCGCA
GCGGTCGCCG ACCGCGCGCA GCGAACGACG AAGGAGCACA GCGAGTGA
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| Protein sequence | MTSPHGSLRP ASVQPRSLGD LADTVAVTVD PAARGVLVSG VVLGSADVQP GDLFVAVPGA
RSHGARFTAA AVAAGAVAVL TDTEGLALLE STDEGLALVH GTPVVLLPQG SDPQRAAGSA
ASWFYDHPSA ALTSFGVTGT NGKTTTTYLL DHLLTALGRT VGLVGTVETR SGARVLPSRL
TTPDAATLQG VLATMREDGV DVLAMEVSSH SISQRRIDGL HFDVAGFTNL SQDHLDFHGD
LDRYFAAKAE LFTAERARRG VVVVDDEWGR RLAATADIPT VTLSVEHSGG PQSDWTVRDV
HAGASGSTFS VVHRDGRSVR ARTALPGSFN VANAALAIVM VVESGIEVGT VTAALEAAGG
LSPAVPGRME QVSDSPRVVV DFAHNPDALA LALAALRPTT AGRLVVVFGA TGERDTTKRP
VMGRIAVEGA DVVVVTDDDP HGEAADGIRA EVLAGAREAA AQPGCDVDVL EAAPRALAIR
AAVLAADDED TVLVAGRGHE VWQEIDGVDH PLDDRVEARA AVADRAQRTT KEHSE
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