Gene Sked_22400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_22400 
Symbol 
ID8633875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2495857 
End bp2496699 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content74% 
IMG OID 
ProductrRNA methylase 
Protein accessionYP_003314989 
Protein GI269795534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA TCACCAGCAC CCGCAGCGAT CGGGTGAAGA TGGTCCGGTC GTTGTCTGGG 
CGTCCTGCTC GTTCCCGCAC CGGCCGGTTC CTCGTCGAGG GACCGCAGGG TGTGCGCGAG
GCAGTCCGGC ACCGCCCGGA GGCCGTCCGT GACGTCTACC TCACGGCGGA GTCCCGCGAC
CGCTACCGCG AGATCGTCGC GGACGCCGAG GCCGCCCGCG TCTACTTCCA CGTGACCACG
CCCGAGGTGA TCGAGGCCAT GAGCCCCGAC TCCCAGGGCG TGCTCGCGGT GCTCGACCTC
CCCGCACCGG GCGACGGTCC CGAGGCCGCC CTCGACGCGG CCCTCGCCCG AGCACCGCGG
CTCGTCGCGG TGCTGTCGAA CGTCCGTGAC CCCGGGAACG CGGGTGCGGT CATCCGCGCC
GCCGACGCCG CCGGCGCGGA CCTCGTCGTG CTCACCACGA ACAGCGTCGA CATCCACAGC
CCCAAGGTGG TGCGGTCGAC CGCCGGCTCC CTGTTCCACC TGCCCGTCGT CACGGGGGTG
CCGCTCGACC AGGTCGTCGC CGCGCTCTCC GCGCACGGCC TCCAGACCCT CGCAGCCGAC
GGCGTGGGGA CCCACGACCT CGACGAGCTG CTCGACGTCG CGGGGAGCGC CCCCGAGGGT
GTCCCCGACC TGGCAGCACA CTCCGCCTGG GTCTTCGGCA ACGAGGCCTG GGGGCTCACC
GAGGACGAGC GCGGTCTGGC CGACGCCGTG GTGCGGGTCC CCATCCGCGG GCTCGCCGAG
TCGCTCAACC TCGCGACCGC CGCCACCGTC TGCCTCTACG CGAGCTCTCG CGCCCAACGC
TAG
 
Protein sequence
MTEITSTRSD RVKMVRSLSG RPARSRTGRF LVEGPQGVRE AVRHRPEAVR DVYLTAESRD 
RYREIVADAE AARVYFHVTT PEVIEAMSPD SQGVLAVLDL PAPGDGPEAA LDAALARAPR
LVAVLSNVRD PGNAGAVIRA ADAAGADLVV LTTNSVDIHS PKVVRSTAGS LFHLPVVTGV
PLDQVVAALS AHGLQTLAAD GVGTHDLDEL LDVAGSAPEG VPDLAAHSAW VFGNEAWGLT
EDERGLADAV VRVPIRGLAE SLNLATAATV CLYASSRAQR