Gene Sked_22230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_22230 
Symbol 
ID8633858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2476833 
End bp2478095 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content70% 
IMG OID 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_003314972 
Protein GI269795517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.948003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAACG TTCTCGATGA GCTCACCTGG CGTGGGCTGA TCAGCCAGAC CACCGACATG 
GACGCGCTCC GCGAAGCGCT CGACGGCGGC CCGGTCACGT ACTACTGCGG CTTCGACCCG
ACTGCGCCGA GCCTGCACCA CGGCCACCTC GTGCAGCTGG TGCTGCTGCG TCACCTCCAG
CTCGCCGGGC ACCGGCCGAT CGCCCTGGTG GGTGGGGCGA CCGGGCTGAT CGGCGACCCG
CGCATGTCGG GGGAGCGGGT GCTCAACTCC CGTGAGGTGG TGGGCGAGTG GGTGGAGCGC
CTGCGCTCCC AGATCTCGCG GTTCCTCGAC TTCGACGGCG ACAACCCCGC GCAGATGGTC
AACAACCTCG ACTGGACCGG TGAGCTCACC GCGATCGACT TCCTGCGTGA CATCGGCAAG
CACTACCGCA TGGGCACGAT GCTCGCCAAG GACACCGTCG CACGCCGGCT CGAGAGCAGC
GAGGGGCTGT CCTTCACGGA GTTCAGCTAC CAGATCCTCC AGGGGATCGA CTACCTGGAG
CTCAACCGTC GTCACGGGTG CACGCTGCAG ACCGGCGGCA ACGACCAGTG GGGCAACCTC
CTGTCCGGGG TCGAGCTCGT CCGCAAGTCG GAGCAGCGCT CCGTGCACGC GCTCACGACG
CCGCTCATCA CCAAGGCCGA CGGCACCAAG TTCGGCAAGT CCGAGGGGGG AGCCGTGTGG
CTCGACCCCG AGATGATGAG CCCGTACGCC TTCTACCAGT TCTGGCTCAA CGCGGACGAC
GCCGACGTCG TGCGGTTCTT GAAGATCTTC ACGTTCCGCT CGGCCGAGGA GATCGACGAG
CTCGCCGTCG CCGTGGCAGA GCGTCCGGCT GCTCGCGAGG CGCAGCGCGC GCTGGCCGGC
GACGTGACGT CGCTGGTCCA CGGAGCCAGG GCGACCGAGG CTGCTGTCGC CGCGAGCCAG
GCGCTCTTCG GGCGGGGGGA GCTGTCGGCC CTCGACGAGG CGACGCTCGT CGCGGCCGTC
GCGGGGCTGC CCTCTGCTGA GGGGGCGCCG GGCGACCTCG TCGTCGACCT GCTCGTCGAG
ACGCAGCTCG TCGCGTCGAA GGGTGCTGCC CGTCGCGCCG TCGCCGAGGG TGGTGTCTAC
GTCAACAACG TCAAGGTCGT CGGTGACGAC GCGACCCTCG CTGCCGCGGA CCTGCTGCAG
GGACGGGCCG CCGTGCTGCG CCGGGGCAAG AAGACGCTCG GGGTCGTGAC GGCCAAGGCC
TGA
 
Protein sequence
MTNVLDELTW RGLISQTTDM DALREALDGG PVTYYCGFDP TAPSLHHGHL VQLVLLRHLQ 
LAGHRPIALV GGATGLIGDP RMSGERVLNS REVVGEWVER LRSQISRFLD FDGDNPAQMV
NNLDWTGELT AIDFLRDIGK HYRMGTMLAK DTVARRLESS EGLSFTEFSY QILQGIDYLE
LNRRHGCTLQ TGGNDQWGNL LSGVELVRKS EQRSVHALTT PLITKADGTK FGKSEGGAVW
LDPEMMSPYA FYQFWLNADD ADVVRFLKIF TFRSAEEIDE LAVAVAERPA AREAQRALAG
DVTSLVHGAR ATEAAVAASQ ALFGRGELSA LDEATLVAAV AGLPSAEGAP GDLVVDLLVE
TQLVASKGAA RRAVAEGGVY VNNVKVVGDD ATLAAADLLQ GRAAVLRRGK KTLGVVTAKA