Gene Sked_22080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_22080 
Symbol 
ID8633843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2455472 
End bp2457136 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content70% 
IMG OID 
ProductCTP synthase 
Protein accessionYP_003314961 
Protein GI269795506 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.202828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.968992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGGC TCCAGTCCAG CAACCGAGTC CGGTCGGAAT CGACGACACG GCACATCTTC 
GTGACCGGGG GTGTCGCCTC CTCCCTGGGT AAGGGACTGA CGGCGTCCAG CCTCGGTCGA
CTGCTCCGGG CCCGCGGGCT CCGAGTCACC ATGCAGAAGC TCGACCCGTA CCTCAACGTG
GACCCGGGCA CCATGAACCC GTTCCAGCAC GGTGAGGTCT TCGTCACCGA GGACGGGGCC
GAGACCGACC TCGACATCGG GCACTACGAG CGCTTCCTCG ACGTCGACCT CGAGGCGGCG
GCGAACGTCA CGACCGGCCA GGTGTACTCC CAGGTCATCG CCAAGGAACG ACGCGGCGAG
TACCTCGGCG ACACCGTCCA GGTCATCCCG CACATCACCG ACGAGATCAA GAGCCGCATG
CGTGCGCAGG CGAGCGACGA CGTCGACGTG ATCATCACCG AGATCGGCGG GACCGTCGGG
GACATCGAGT CCCAGCCCTT CCTCGAGGCC GCCCGTCAGG TGCGCCACGA GCTCGGCCGC
GACGACGTGT TCTTCCTCCA CGTCTCCCTC GTGCCGTACA TCGGCCCGAG CGGAGAGCTC
AAGACGAAGC CGACCCAGCA CTCGGTCGCC GCGCTGCGCA GCATCGGCAT CCAGCCCGAC
GCGATCGTGC TCCGCTCGGA CCGCGAGGTC CCCGAGGGCA CCAAGCGCAA GATCGCGCTG
TTCTGCGACG TCGACAACGA GGCCGTCATC AACTGCATGG ACGCGCCGAG CATCTACGAC
ATCCCGCGGG TCATCCACTC GGAGGGCCTC GACGCCTACG TCGTGCGCCG CCTCGGCCTG
CCCTTCCACG ACGTGGACTG GGACGGCTGG TCGCAGCTCC TCGAGCGCGT GCACGAGCCC
GCGCACCGCG TGGAGATCGC GCTCGTCGGC AAGTACATCG ACCTCCCCGA CGCGTACCTC
TCGGTCACCG AGGCGCTGCG CGCCGGCGGG TTCGCCAACG ACACCAAGGT CGTCATCCGC
TGGGTCCCGT CCGACGACTG CCAGACCCCA GAGGGCGCCC AGACGTCCCT CGAGGGCGTC
GACGCGGTCC TCGTCCCCGG CGGCTTCGGC GTGCGCGGCA TCGAGGGCAA GCTCGGCGCG
CTGCGCTGGG CGCGCGAGGG CGGCGTGCCG ACGCTCGGCA TCTGCCTCGG CCTGCAGTCC
ATGGTCATGG AGTACGCACG GAACGTCGTC GGGCTCGAGG GCGCGTCGTC GTCGGAGTTC
GACCCGGCGA CCCCGCACCC GGTGATCGCG ACCATGGCGG AGCAGCAGAG CTTCGTCGAC
GGCGCGGGCG ACCTCGGCGG CACCATGCGC CTGGGCGCCT ACGACGCGGC CCTCGCGCCG
GGGTCCGTCG CGGCCGGCGT GTACGGCTCG GAGCTCGTGT CGGAGCGTCA CCGCCACCGC
TACGAGGTGA ACAACGCCTA CCGCGCGCAG CTCGAGGAGG CCGGGCTGGT CTTCTCCGGC
ACCTCGCCCG ACGGCACCCT CGTGGAGTTC GTCGAGCTGG CCAAGGACGT GCACCCGTTC
TACATCTCGA CGCAGGCGCA CCCCGAGTTC AAGTCCCGCC CGACCCGCGC GCACCCGCTG
TTCGCCGGTC TCGTCCGGGC TGCCCTCGAC CGCCAGGGCG TCTGA
 
Protein sequence
MNRLQSSNRV RSESTTRHIF VTGGVASSLG KGLTASSLGR LLRARGLRVT MQKLDPYLNV 
DPGTMNPFQH GEVFVTEDGA ETDLDIGHYE RFLDVDLEAA ANVTTGQVYS QVIAKERRGE
YLGDTVQVIP HITDEIKSRM RAQASDDVDV IITEIGGTVG DIESQPFLEA ARQVRHELGR
DDVFFLHVSL VPYIGPSGEL KTKPTQHSVA ALRSIGIQPD AIVLRSDREV PEGTKRKIAL
FCDVDNEAVI NCMDAPSIYD IPRVIHSEGL DAYVVRRLGL PFHDVDWDGW SQLLERVHEP
AHRVEIALVG KYIDLPDAYL SVTEALRAGG FANDTKVVIR WVPSDDCQTP EGAQTSLEGV
DAVLVPGGFG VRGIEGKLGA LRWAREGGVP TLGICLGLQS MVMEYARNVV GLEGASSSEF
DPATPHPVIA TMAEQQSFVD GAGDLGGTMR LGAYDAALAP GSVAAGVYGS ELVSERHRHR
YEVNNAYRAQ LEEAGLVFSG TSPDGTLVEF VELAKDVHPF YISTQAHPEF KSRPTRAHPL
FAGLVRAALD RQGV