Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_21960 |
Symbol | |
ID | 8633831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2442611 |
End bp | 2443438 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | predicted transcriptional regulator |
Protein accession | YP_003314949 |
Protein GI | 269795494 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.153457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA CGCCCCGCGC GACGCACGCC ACGCCCGCCC GTCTCGCCTC GCCACGCCCG GCGGCAGAGG GCGTCGACCA CGAGTCGACG ACCCGGGCCC GGGTCCTCCA GCACGTCCTG GCCGACGGCC CGGTGACCGC GGCCGCCCTC GCCCGCACGC TCGACCTCAG CGCGGCCGGC ATCCGTCGCC ACCTGGGCTG CCTCGAGGAC GACGGCCTGG TCGCCGTCCA CCACGGGCGC CCGACCGGCG GACGCGGCCG CCCGGCCCGC TCCTACGTCG CGACCGACCG CGCGCACGCC GAGATCTCGG GGGAGTACCC CGACATCGCG AGCCAGGCCC TGCGGTTCCT CGCCGAGGTC GCCGGGAACG GCGCGATCGA GGAGTTCGCC CAGGCCCGCA TGGTCGAGCT CGAGGAGCGC TACTCCGCCG TCGTGACCGC CGACGACGTC GACGGCCGTG TCCGCCAGCT CGCGGACGCG CTCTCGGCCG ACGGCTTCGC CGCCTCGGTC CGCCCGGTCG AGGGCACCTC GACCGTCCAG CTCTGCCAGG GGCACTGCCC GGTCGCGCAC GTCGCGGCCC AGTTCCCCCA GCTGTGCGAC GCCGAGGCGC AGGTCTTCTC GCGCCTCCTC GGCTCGCACA CCCAGCGCCT CGTGACCCTC GCCAACGGCG GGCACGTGTG CACCACCAAC GTGCCCGTGC ACGTCCCGGC ACCCCGGACG CGGTCCGACC GACCGCCCGG GGACCGCGAA CCGCCCGGGC CCCCCGAGCC CGACGGCACC CCAGACCTCT CCGACACCCC CGAACGGCCC ATGGAAGGAA CAAGATGA
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Protein sequence | MTITPRATHA TPARLASPRP AAEGVDHEST TRARVLQHVL ADGPVTAAAL ARTLDLSAAG IRRHLGCLED DGLVAVHHGR PTGGRGRPAR SYVATDRAHA EISGEYPDIA SQALRFLAEV AGNGAIEEFA QARMVELEER YSAVVTADDV DGRVRQLADA LSADGFAASV RPVEGTSTVQ LCQGHCPVAH VAAQFPQLCD AEAQVFSRLL GSHTQRLVTL ANGGHVCTTN VPVHVPAPRT RSDRPPGDRE PPGPPEPDGT PDLSDTPERP MEGTR
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