Gene Sked_21610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21610 
Symbol 
ID8633796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2408113 
End bp2409384 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content75% 
IMG OID 
Productsignal transduction histidine kinase 
Protein accessionYP_003314915 
Protein GI269795460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.334304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGGAA CCCGTGCGCC GCGCACCGTC GACGCGTGGG TCGCAGCCGT CGGGTGGATC 
TTCGCCTGCG GGGTGCTGGT CGCCCTCCCG GTGCTCGACC CGGCCGAACC CGACACGGTC
GTCGCAGCTC CCGGGACCCT GGCCTGGTGG CTCACCCTTG TCACGCTGAC CGCTCAGGCG
CTGGCCGTGA GCCGCGCCAG GACGACGCCC CGTGCGTCCC TCCTCGTCGT CGCTGCGCTC
CCGGTGCTCC TCGCCGCCTC CGGACCGGGC GTCGTCTACA GCCTCACCGG GACGCTCACC
GTCCTCGCGG TCTTCCTCGT CACGCTCGTC CTCCCACCCC GGGACCTCCG CGTCTTGCTG
CCCGCCGCAG CGCTGCTCGT CCTGGCGGGC GAGTCCATCA ACGCCATCGT CACCGGCACC
GACCCGCTGC CCGTCGTCCT CGGCTCCGCC GCGCTCCAGG CGCTCGCCGT CGTCGGGCTG
CCGTGCGTCG TGGCGCTCGC GGTCGCGGCC CGCCGCGAGG CCCGCATGGC GCACCGCGGC
GAGGAGCAGG CGCTCGTGCG CGAGCGCGAC GCCCTCGTGC AGGCCGCAGT GGCCGACGAG
CGCACCGCGA TGGCCCGCGA GCTCCACGAC ATCGCCGCGC ACCACATGTC CGGCATCGCG
ATCATGTCCG CGGCGATCGC CCGCCAGATC GACACCGACC CCGAGGCCGC GAAGCGGTCC
GTGCAGCAGG TGCGCGAGCA GAGCACCGCC GTGCTCGACG ACCTGCGCCG CCTGGTCGGG
CTGCTCCGCC ACGACGACGG TGTGGCGACG CGGTCCGTCG AGACCGTCGC CGCGCTGCGC
GACCTCGTCG ACGACCGCCG CACCGCGGGC CTGGACGTCG AGCTCCGCGT GTCAGAGACG
CCCGGGCACC AGCTCGGGGA GGGCGTCGGG CCGCTCGCCC AGCTCGTCGT GTTCCGCATG
GTCCAGGAGG GGCTCGCCAA CGCCGCGATG CACGCCCCGG GTGCCGCGTG CGTCGTCGAC
GTGGACGACC AGGACGAGGC AGCACTCATC GTCCGTGTGC ACAACGCCGC CCCCACCCAG
CCCACCATCC GCACCGGGAG CAGCCCGGGC TTCGGGCTGC TCGGCATGGG GGAGCGAGCC
GCGCTCGTCG GGGCCCACCT CGCCTACGGC AGCACCGTGG ACGGCGGCTG GGAGGTGCGG
CTCACCCTGC CTCGCGACAC CACCCACCCG CCGCGCACGA CGACCGACCA GCTGCCAGGA
GACCCCGCAT GA
 
Protein sequence
MTGTRAPRTV DAWVAAVGWI FACGVLVALP VLDPAEPDTV VAAPGTLAWW LTLVTLTAQA 
LAVSRARTTP RASLLVVAAL PVLLAASGPG VVYSLTGTLT VLAVFLVTLV LPPRDLRVLL
PAAALLVLAG ESINAIVTGT DPLPVVLGSA ALQALAVVGL PCVVALAVAA RREARMAHRG
EEQALVRERD ALVQAAVADE RTAMARELHD IAAHHMSGIA IMSAAIARQI DTDPEAAKRS
VQQVREQSTA VLDDLRRLVG LLRHDDGVAT RSVETVAALR DLVDDRRTAG LDVELRVSET
PGHQLGEGVG PLAQLVVFRM VQEGLANAAM HAPGAACVVD VDDQDEAALI VRVHNAAPTQ
PTIRTGSSPG FGLLGMGERA ALVGAHLAYG STVDGGWEVR LTLPRDTTHP PRTTTDQLPG
DPA