Gene Sked_21440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21440 
Symbol 
ID8633779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2391299 
End bp2392132 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content72% 
IMG OID 
Productsiderophore-interacting protein 
Protein accessionYP_003314898 
Protein GI269795443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.522532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.530536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGCA CCAACCTCAG CGCGACCCGG CTCAAGCCCG AGGTCTCCGA GCTCCTCACC 
CTCGAGGTCT TGCGACGCGA GCAGGTCTCG CCCAGCTTCG TCCGCGTGAC GCTCGGCGGA
GGCGACGCGG AGAAGTTCGT CCCGATGGGC TTCGACCAGT GGTTCCGGCT CTTCATCCCC
GTCGCCGACG GCACGCTCGG TCGCCTCCCG CAGAAGCTGG ACACCCTGTC CTACCTGAGG
TTCCTGACCA TCTCGAAGGC CACCCGACCG GTGCTGCGCA ACTACACCGT GCGCGCCTAC
CGTGCCGACG GACCGCGTGG CCCCGAGATC GACGTCGACC TCGTGGTCCA CGGCTCTGTC
GCCGACGGCA CCTCGGGTCC CGCCGCCACC TGGGCCCAGA CCTGCACCCC GGGCGACGTC
GTCGCGATCC TCGACGAGGG CATCGGCTTC AACCCGCCCG CCGGCGTCGA CCGCGTCCTC
CTCGTCGCCG ACGAGACGGG CCTCCCTGCC GTCGCCGGGA TCCTCGCCTC GCTGCCCGCG
ACCGCCACGG GGACAGCCGT GGTCGAGATC CCTGCCGACG GGGACCAGCA GGACATGACC
GCGCCCCCGG GCGTCGAGGT CCGCTGGGTC GTGCGCACCG ACCCGCACGC CGTCCCGGGG
CGGGCCGCGC TCGCGGCCGT CCAGGCGTTC CCGGTCACCG ACGAGCCGTT CTACGGCTGG
GCCGTCGGCG AGGCAGCCCT GCCGGTCGCC CTCCGCAGGC ACTGGGTCGC CGCCGGGCTC
CCCAAGGAGA ACATCATGTT CTGCGGCTAC TGGAAGGTCG GCAAGGCGCA CTGA
 
Protein sequence
MARTNLSATR LKPEVSELLT LEVLRREQVS PSFVRVTLGG GDAEKFVPMG FDQWFRLFIP 
VADGTLGRLP QKLDTLSYLR FLTISKATRP VLRNYTVRAY RADGPRGPEI DVDLVVHGSV
ADGTSGPAAT WAQTCTPGDV VAILDEGIGF NPPAGVDRVL LVADETGLPA VAGILASLPA
TATGTAVVEI PADGDQQDMT APPGVEVRWV VRTDPHAVPG RAALAAVQAF PVTDEPFYGW
AVGEAALPVA LRRHWVAAGL PKENIMFCGY WKVGKAH