Gene Sked_21390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21390 
Symbol 
ID8633774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2387871 
End bp2388668 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID 
Productphosphomethylpyrimidine kinase 
Protein accessionYP_003314893 
Protein GI269795438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.498075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACGC TTGCCTATGT CATCGCTGGA TCCGAGGCCA CTGGTGGCGC GGGGATCCAG 
GCCGACCTGA AGACGTTCCA GCAGCTGGGC GTCTACGGCG TCGGGACGCT CACCTGCATC
GTGTCGTTCG ACCCGAAGGC CGGCTGGGGG CACAGGTTCG TGCCGGTGGC GCCCGAGGTG
ATCGCGGACC AGTTCGAGGC TGCGACGAGC TGCCACGACC TCGACGTGGT GAAGATCGGC
ATGCTGGGGA CCCCTGCGAC CATCGACGTG GTCGCCCGCT CGCTCGCGAG CCAGCCGTGG
CGGCACGTGG TCCTCGACCC CGTCCTCATC TGCAAGGGCC AGGAGCCCGG CGCGGCCCTC
GACACGGACA CGGCGCTGCG CGAGCAGATC CTCCCGCTCG CCACGGTGAT CACCCCGAAC
GTCTTCGAGG CCAAGACCCT CGCGGGCATG GACTCGATCA CGACGGTCGC GGACCTCGAG
GAGGCAGCAC GGCGCATCTA CGACCTCGGG CCGCGCTACG TGGTGGTCAA GGGCGGCGTC
GAGCTCGACG GCCCCGACGC CGTGGACCTG CTCTTCGACG GCGAGGAGGT CACCGTGTAC
TCGACGCCCA AGATCGGCCA GGAGCGGGTC AGCGGCGCCG GGTGCACCTT TGCCGCGGCA
ATCACGGCCG AGCTCGCGAA GGGCACGGAC GTGCCGGAGG CCGTCGCCGT CGCCAAGCGG
CTCGTCACGG CGGGCATCAC CGAGCGCGTC AGCTCGAACG CCCCCTTCGA CGCCGTCTGG
CAGGGCGCTG GGGTCTGA
 
Protein sequence
MVTLAYVIAG SEATGGAGIQ ADLKTFQQLG VYGVGTLTCI VSFDPKAGWG HRFVPVAPEV 
IADQFEAATS CHDLDVVKIG MLGTPATIDV VARSLASQPW RHVVLDPVLI CKGQEPGAAL
DTDTALREQI LPLATVITPN VFEAKTLAGM DSITTVADLE EAARRIYDLG PRYVVVKGGV
ELDGPDAVDL LFDGEEVTVY STPKIGQERV SGAGCTFAAA ITAELAKGTD VPEAVAVAKR
LVTAGITERV SSNAPFDAVW QGAGV