Gene Sked_21360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21360 
Symbol 
ID8633771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2385944 
End bp2386564 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003314890 
Protein GI269795435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.127836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.357603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGCGC AGACCGTGGC ACTGACCAGC AAGGACGTCG TCGACGCGGC GATCGCCATC 
CTCGACGAGT ACGGTCTCGG CGACCTCACC ATGCGGCGGC TCGCGACCGC GCTCGGCGTC
CAGCCCGGCG CCCTGTACTG GCACGTGGCC AACAAGCAGG CGCTGCTCGG TGCCGTCGCC
GACACGATCC TCGACGGTCT CGACGACGAC ATGCCGTCGG GCGACTGGGA CCTGCGCTTC
AACGAGCTGG CCCACCGGCT GCGCGCGGCG CTCCTCGCGC ACCGCGACGG CGCCGAGGTG
GTCGCGGCCG CGCACGCGCT GCGCACCGGG CGGGGGAGCA CCCTCGTCCT GCTCACCCAG
GTGCTCACCG ACGCCGGCTT CACCGAGGTC GAGGCGGAGC TCGCCGCGCT GGCGGTGCTG
CACTACGTGC TGGGCCACAC CGTCGACGAG CAGGGGCACG CCCAGTCGGC GGGCCTCGTC
GCGGGCGCGG CGTCACCGGG CGCGACGGAG GGGATCGCCG ACGGTCCGCA GACCGTTGAC
GACCCCCTCC TGGGTGAGAC CGCGCGCTTC GGCTTCGGCC TCAGCGTGTT CGTGGACGGG
CTCCGGGCCC GGCTGACCTG A
 
Protein sequence
MRAQTVALTS KDVVDAAIAI LDEYGLGDLT MRRLATALGV QPGALYWHVA NKQALLGAVA 
DTILDGLDDD MPSGDWDLRF NELAHRLRAA LLAHRDGAEV VAAAHALRTG RGSTLVLLTQ
VLTDAGFTEV EAELAALAVL HYVLGHTVDE QGHAQSAGLV AGAASPGATE GIADGPQTVD
DPLLGETARF GFGLSVFVDG LRARLT