Gene Sked_21230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21230 
Symbol 
ID8633758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2367670 
End bp2368287 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content74% 
IMG OID 
Productlysine efflux permease 
Protein accessionYP_003314877 
Protein GI269795422 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0915178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACCT CACTCCTCGC AGCCCTGTCC GGCGCGGCCT TCGGTCTCTC GCTCATCGTC 
GCCATCGGCG CCCAGAACGT CTTCGTGCTG CGCCAGGGCC TGCGACGCAG CCACGTGCTG
CCCGTCGTGC TGGTGTGCGC GGTATCGGAC GTCGTGCTCA TCTCCGCCGG TGTCGCCGGC
CTCGGCGGGA TCCTCGACCG GGCGCCCGGG GTCGCCACGG CTGCCCGCGT CGCCGGCGCA
GCGTTCCTGC TCGGCTATGC GGTGCTCGCC GCGCGTCGCG CGCTCCGACC GGCCGAGGTC
GAGGGCCTCG AGGCCGAGCG CGGCACGGGG TCCCGGAGCG CAGCGGTCCT CACGGCGCTC
GCCCTCACCT GGCTCAACCC GCACGTCTAC CTCGACACCG TGCTGCTCCT CGGGTCGGTC
GCCGCGTCGC ACGGTGACCT CCGGTGGTGG TTCGGCCTCG GCGCGACGAC AGCGAGTCTC
GTGTGGTTCA CCGCCCTGGG CTTCGGGGCC CGCCTGGTGG CACCGCTGTT CGCCAGGCCC
GGGGCGTGGC GCGTCCTGGA CGGCGCGATC GCCGTCGTCA TGCTCGCCAT CGCGGTCGGG
CTGCTCGCGG GCATCTGA
 
Protein sequence
MPTSLLAALS GAAFGLSLIV AIGAQNVFVL RQGLRRSHVL PVVLVCAVSD VVLISAGVAG 
LGGILDRAPG VATAARVAGA AFLLGYAVLA ARRALRPAEV EGLEAERGTG SRSAAVLTAL
ALTWLNPHVY LDTVLLLGSV AASHGDLRWW FGLGATTASL VWFTALGFGA RLVAPLFARP
GAWRVLDGAI AVVMLAIAVG LLAGI