Gene Sked_20450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20450 
Symbol 
ID8633680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2278095 
End bp2278799 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314801 
Protein GI269795346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCC GAGCACTCGT GGTCCGAGGG GGGTGGGACG GCCATGCACC GCAGGCCGCG 
ACCGACCTCT TCGTGCCCTT CCTGCGCGAG CAGGGCTTCG AGGTCCAGGT CGAGGAGGAC
AACGAGGTCT ACGCCGACCC CGACCTCATG GCGGCCACCG ACCTCGTCCT CCAGTGCGTG
ACCATGTCCG AGATCAGCGG ACCCGCGCTC ACCGGCCTGC GCGCCGCGGT CGAGGCCGGG
ACGGGGCTTG CGGGGTGGCA CGGCGGGATC GCCGACTCCT ACCGCAGCAG CTCGGACTAC
CTCCAGCTGG TCGGCGGGCA GTTCGCCACC CACCCGGGCC GCGCTCCCGA GGACCGCCCC
GGGGACGCGA GCGACAACTA CCTGCGGTAC ACGGTGAACA TCACCGCGGA GGGGCGCGAG
CACCCGGTCA CCGCCGGGAT CGAGGACTTC GAGCTCGACA CCGAGCAGTA CTGGGTGCTG
CACGACGACC TCGTCGACGT CCTGGCGACC ACCACCCACC CGGTCCGCCC CTGGCACCCG
TGGCACCGGC CGGTCACCTC CCCCGCCGTG TGGACCCGGC TCTGGGGCGC CGGACGCGTC
TTCGTCGCCA CCCCCGGGCA CTCGCCCGAG GTCCTCGACG ACCCGAACGT CCGGACGATC
GTGGAGAGGG GGCTGCTGTG GGCGAGCCGC ACGGAGTCGG AGTAG
 
Protein sequence
MTRRALVVRG GWDGHAPQAA TDLFVPFLRE QGFEVQVEED NEVYADPDLM AATDLVLQCV 
TMSEISGPAL TGLRAAVEAG TGLAGWHGGI ADSYRSSSDY LQLVGGQFAT HPGRAPEDRP
GDASDNYLRY TVNITAEGRE HPVTAGIEDF ELDTEQYWVL HDDLVDVLAT TTHPVRPWHP
WHRPVTSPAV WTRLWGAGRV FVATPGHSPE VLDDPNVRTI VERGLLWASR TESE