Gene Sked_20430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20430 
Symbol 
ID8633678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2275803 
End bp2276816 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003314799 
Protein GI269795344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCACCC CCTCGGCCTC CCCCACCCTC CTCGACGTCG CCCGTGCCGC CGGGGTCTCG 
CGGGCGACGG CGTCACGGGT GCTGGCCGGG CAGGCGAACG TGGACCCCGC GCTCGCCGCA
CGCGTCGTCG ACGCCGCCGA GCGGCTCGAC TACCGCACCA ACACCGCAGC CCGCGCCCTG
CGCAGCGGGT CGACGGGTTC GGTCGCCGTC GTGGTCCCGA ACAGCGAGCT GGACGGCCTC
TCTGGCCCGT TCGTCGGTGC GCCGCTGCGT GGGGCCACCA CGACGCTGTT CGCGCAGGGG
CGCCAGCCGG TGCTGCTCCT CGACGACGGG CTCGCCACGG GCCAGCTGCT CCGGTACCTG
ACGGGACCCC ACGTCGACGG CGCTGTCGTG ATCCTGCACC ACGAGACGGA GACGCTGTTC
CGCCGGCTGC ACGGCCTGAC CATCCCGGTG GTCTACGTCG GGCGCACGAG CGACGAGCTC
GCGGCCGACG CCAGCTTCGT CGACTGCGAC AACTACGGCG GGGCGCGTGC CGCGACCCGG
GCGCTCCTCG AGGCTGGTCG GCGACGTCTC GCGACGATCG CCGGCCCCGC GACGTACCGG
CCCGTCACCG AGCGCCTGCG CGGCTTCCTG GACGAGCTCG CCGCCTGGGG CCTGGCCCCG
GGGCCCGTCG TCCACGGGGA GTTCAGCATG CCCGCGGGGG CTGCCGCCGC CGCACAGCTG
CTCCAGCGCG CCTCGGTCGA CGCGATCTTC GCCCAGTCCG ACCTCCTCGC GGTCGGCGCA
GTGCGGATGG TCTCGTCGGC CGGAGGACGG GTCCCTGACG ACGTCTCGGT CGTCGCCTTC
GACGACACGG TGGTCGCAGC GACCTCGGAC CCGCCGCTGA CCTCGGTGCG CCAGCCGCTC
CAGGAGATGG GCGCCCGCGC AGCGGAGCTC TTGCTCCAGA TGATCGCAGG CACGACGACC
GAGCCTGCGC AGGTCACGCT CCCGACGACG CTCACGACCC GCGCCTCGGT CTAG
 
Protein sequence
MRTPSASPTL LDVARAAGVS RATASRVLAG QANVDPALAA RVVDAAERLD YRTNTAARAL 
RSGSTGSVAV VVPNSELDGL SGPFVGAPLR GATTTLFAQG RQPVLLLDDG LATGQLLRYL
TGPHVDGAVV ILHHETETLF RRLHGLTIPV VYVGRTSDEL AADASFVDCD NYGGARAATR
ALLEAGRRRL ATIAGPATYR PVTERLRGFL DELAAWGLAP GPVVHGEFSM PAGAAAAAQL
LQRASVDAIF AQSDLLAVGA VRMVSSAGGR VPDDVSVVAF DDTVVAATSD PPLTSVRQPL
QEMGARAAEL LLQMIAGTTT EPAQVTLPTT LTTRASV