Gene Sked_20030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20030 
Symbol 
ID8633638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2228188 
End bp2229192 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content65% 
IMG OID 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_003314761 
Protein GI269795306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.629756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATCC GCGTCGGAAT CAACGGCTTC GGTCGTATTG GACGTAACTT CTTCCGCGCA 
ATCCTTGCGT CCGGAGCAGA CATCGAGATC GTCGGTGTCA ACGACCTCAC CGACAACAAG
ACGCTTGCGC ACCTGCTCAA GTACGACTCT GTCCTGGGCC GCCTCGGCGC CGAGGTCTCC
TACGACGACG ACTCGATCTC CGTCGACGGC AAGAAGATCA AGGCCCTCGC AGAGCGCAAC
CCGGCAGACC TGCCCTGGGG CGCTCTCGGT GCCGACATCG TCATCGAGTC GACCGGCTTC
TTCACCGACG CGACCAAGGC CAAGGCTCAC ATCGAGGCCG GCGCCAAGAA GGTCATCATC
TCCGCTCCGG CGAAGAACGA GGACGGCACC TTCGTCATCG GCGTCAACGA GGGCGACTAC
GACCCCGCGA CGATGCACAT CATCTCCAAC GCGTCGTGCA CCACGAACTG CCTCGCCCCG
ATGGCCAAGG TCCTCGACGA GGCCTTCGGC ATCGAGCGTG GCCTCATGAC CACGATCCAC
GCGTACACCG GTGACCAGAA CCTGCAGGAC GGCCCGCACT CGGACCTCCG CCGCGCCCGC
GCAGCAGCGA TCAACATCGT CCCGACCTCG ACCGGTGCGG CCAAGGCCGT CTCGCTCGTC
CTCCCGCAGC TCAAGGGCAA GCTCGACGGC TACGCGCTCC GCGTCCCCGT GCCCACCGGC
TCGGCGACCG ACCTCACCTT CACCGCCTCC AAGGAGGTCA CGGTCGAGTC GGTCAACGCC
GCGATCAAGG CTGCAGCCGA GGGCCCCCTC AAGGGCATCC TCGTCTACAC CGAGGACCCG
ATCGTCTCCT CCGACATCGT GACCGACCCC GCCTCGAGCA TCTTCGACGC CGGTCTCACG
AAGGTCATCG GCGACCAGGT CAAGGTCGTC TCCTGGTACG ACAACGAGTG GGGCTACTCC
AACCGCCTCG TCGACCTCAC GGTCCTCGTC GGCGAGAAGC TCTGA
 
Protein sequence
MTIRVGINGF GRIGRNFFRA ILASGADIEI VGVNDLTDNK TLAHLLKYDS VLGRLGAEVS 
YDDDSISVDG KKIKALAERN PADLPWGALG ADIVIESTGF FTDATKAKAH IEAGAKKVII
SAPAKNEDGT FVIGVNEGDY DPATMHIISN ASCTTNCLAP MAKVLDEAFG IERGLMTTIH
AYTGDQNLQD GPHSDLRRAR AAAINIVPTS TGAAKAVSLV LPQLKGKLDG YALRVPVPTG
SATDLTFTAS KEVTVESVNA AIKAAAEGPL KGILVYTEDP IVSSDIVTDP ASSIFDAGLT
KVIGDQVKVV SWYDNEWGYS NRLVDLTVLV GEKL