Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_19940 |
Symbol | |
ID | 8633629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 2217811 |
End bp | 2219988 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transketolase |
Protein accession | YP_003314752 |
Protein GI | 269795297 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACTCCT TCACCCCAGC GCAGCAGCCC TTCGACTGGT CCGAGCTCGA CGACCGCGCG GTCGCCACGA TCAAGGCTCT CGCCGCCGAC GCCGTCGAGA AGGTCGGCAA CGGCCACCCC GGGACCGCGA TCTCGCTCGC GCCCGCCGCG TACACGCTCT TCCAGAAGGT CATGCGTCAC GACCCGAGCG ACTCGCACTG GGTCGGTCGC GACCGCTTCG TGCTGTCTGC CGGTCACTCG TCGCTGACCA TCTACCTCCA GCTGTTCCTC TCCGGCTACG ACGTCGACAT CGACGACATC AAGTCGCTGC GCACCTGGGG CTCGAAGACC CCCGGTCACC CCGAGTACAC GCACACCGAC GGTGTCGAGA TCACCACCGG CCCCCTCGGC CAGGGCCTCG CCTCCGCCGT CGGCATGGCC ATGGCGGCCC GTCGCGAGCG CGGCCTGCTC GACCCGAGCA CCGCCCCCGG CGAGAGCCCC TTCGACCACT CGATCTTCGT GATCGCCGGC GACGGCGACC TGCAGGAGGG CGTCACCTCC GAGGCCTCGT CCCTCGCGGG CCACCAGCAG CTCGGCAACC TCGTGGTCAT CTACGACCAG AACCAGATCT CGATCGAGGA CGACACCAAC ATCTCGTTCT CCGAGGACGT CCTCGCTCGC TACGAGTCCT ACGGCTGGCA CACCCAGCGC GTCGACTGGA CTCAGGGTGG CACCGGCTAC GTCGAGAACG TCGAGGAGCT GCACGCCGCG CTCTCGGCCG CGAAGTCCGA GACCGGCAAG CCGTCGATCA TCGCGCTGCG CACCATCATC GGCTGGCCGT CGCCGAAGAA GCAGAACACC GGCAAGATCC ACGGCTCGGC GCTCGGCGCC GACGAGGTCG CCGGCCTCAA GGTCAACCTC GGCCTCGACC CGGAGAAGTC CTTCGACGTC GCCGACGAGG TCCTCGCCCA CGCCCGCGAG GTCGGTGCCC GCGGCGCCGA GGCCCGCAAG GCCTGGACCG TCGGCTTCGA CGCGTGGAAG ACCGCCAACC CCGAGGGCGC TGAGCTCCTC GAGCGCCTCA CCACCCGCAC CCTCCCCGAG GGCTGGGACT CCGTGCTCCC GACCTTCGAG GGCGGCAAGG ACGTCTCGAC GCGTGCCGCG TCGGGCAAGG TCCTCACGGC GCTCGCGCCG GTGCTCCCCG AGCTCTGGGG CGGCTCGGCC GACCTCGCCG AGTCCAACAA CACCACGATG GAGGGCGAGC CGTCCTTCAT CCCCGCCGAG CACTCCACGG CGGCCTGGAC CGGCAACCCC CACGGGCGCA CGCTGCACTT CGGCATCCGT GAGCACGCCA TGGGCGCGAT CCTCAACGGC ATCGTGCTGC ACGGCGGGAC GCGCGCCTAC GGCGGCACGT TCCTCGTGTT CTCCGACTAC ATGCGTCCGG CGGTCCGCCT CGCGGCCCTC ATGCGCATCC CGTCGACCTT CGTCTGGACC CACGACTCCA TCGGTCTCGG CGAGGACGGC CCGACGCACC AGCCGATCGA GCACCTCGCC GCGCTGCGCG CCATCCCCGG TCTCGACGTC GTCCGCCCCG CGGACGCCAA CGAGGTCGCC TGGGCCTGGA AGACCATCCT CGGTCACACC GACCGCCCGG CCGGCATCGT CCTGACCCGT CAGAACGTGC CGACCTACGC CCGTGGAGAG GGTGCCGCCA CCGGCGAGAC CTTCGGCTCG GCCGCTGGCG TCGAGAAGGG TGCCTACGTC CTCGCCGAGG CCCCGAACGG CACGCCCGAC GTGATCCTGC TGGGCACCGG CTCCGAGGTC CAGCTGGCCG TCGACGCCCG CGAGGCCCTC AAGGCCGACG GCGTCAACGC CCGCGTGGTG TCCGTCCCGA GCCGCGAGTG GTTCGACCAG CAGGACGCGG AGTACCGCGA GTCGGTCCTC CCCGCCTCGG TCAAGGCCCG CGTGTCGGTC GAGGCCGCCG TGGCCCAGGG CTGGCGCGAG CTCGTCGGCG ACGCCGGCCG CTCGATCTCG ATCGAGCACT ACGGCGCCTC CGCAGACTTC AAGACGCTCT ACCGCGAGTT CGGCATCACC ACCGAGGCCG TCGTGGCCGC CGCCAAGGAG TCCATCGAGG CCGCGGGCTC CTCCGCCCCC GGCGCAGCCC CGCAGCCCTC CGAGGGCGGC ACGGCCGACC GTCCCTGA
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Protein sequence | MNSFTPAQQP FDWSELDDRA VATIKALAAD AVEKVGNGHP GTAISLAPAA YTLFQKVMRH DPSDSHWVGR DRFVLSAGHS SLTIYLQLFL SGYDVDIDDI KSLRTWGSKT PGHPEYTHTD GVEITTGPLG QGLASAVGMA MAARRERGLL DPSTAPGESP FDHSIFVIAG DGDLQEGVTS EASSLAGHQQ LGNLVVIYDQ NQISIEDDTN ISFSEDVLAR YESYGWHTQR VDWTQGGTGY VENVEELHAA LSAAKSETGK PSIIALRTII GWPSPKKQNT GKIHGSALGA DEVAGLKVNL GLDPEKSFDV ADEVLAHARE VGARGAEARK AWTVGFDAWK TANPEGAELL ERLTTRTLPE GWDSVLPTFE GGKDVSTRAA SGKVLTALAP VLPELWGGSA DLAESNNTTM EGEPSFIPAE HSTAAWTGNP HGRTLHFGIR EHAMGAILNG IVLHGGTRAY GGTFLVFSDY MRPAVRLAAL MRIPSTFVWT HDSIGLGEDG PTHQPIEHLA ALRAIPGLDV VRPADANEVA WAWKTILGHT DRPAGIVLTR QNVPTYARGE GAATGETFGS AAGVEKGAYV LAEAPNGTPD VILLGTGSEV QLAVDAREAL KADGVNARVV SVPSREWFDQ QDAEYRESVL PASVKARVSV EAAVAQGWRE LVGDAGRSIS IEHYGASADF KTLYREFGIT TEAVVAAAKE SIEAAGSSAP GAAPQPSEGG TADRP
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