| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_19830 |
|---|
| Symbol | |
|---|
| ID | 8633618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2207285 |
|---|
| End bp | 2208880 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | small GTP-binding protein domain/GTP-binding conserved hypothetical protein |
|---|
| Protein accession | YP_003314741 |
|---|
| Protein GI | 269795286 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC CTGAGCAGAA CCTTTCAGAG GACACCGCGA CGACCGCGGA CCCCACATCA
GCGCCACAGC CGACGTCTGA CGTCCCCGAG TCTGCCCAGA CGGAGTCGTC TGAGACGACG
CAGCCGCAGG TGCCCCTCAG CGACGGCACG GAGTCCGACG GCGACGATGC CCAGCGCGAG
CACGCGCTCC GCGTCGGCCT CGAGGAGTAC GAGCTCGGCG ACGAGGACCT CGCGCTCCTC
GGCGGCGAGT TCGACGACGG CTCTGGCGAG GGTGTCGGCG TGCCGCTGCC CGTGCTGGCC
GTGGTCGGCC GCCCGAACGT CGGCAAGTCG ACGCTCGTCA ACCGCATCAT CGGCCGCCGT
GAGGCTGTCG TCGAGGACAA GCCCGGCGTG ACGCGTGACC GCGTCAGCTA CCCGGCCGAG
TGGGGCGGGC GCCGCTTCAT GCTCGTCGAC ACCGGTGGCT GGGAGGTCGA CGTCGCGGGC
ATCGAGGCGC GCGTGGCCGA GCAGGCCGAG GTGGCCATCT CGCTCGCCGA CGCCGTGATG
TTCGTGGTCG ACGCGACCGT GGGCCCGACC GCGACCGACG AGCAGGTCGT CAAGCTGCTC
CGCAAGTCCG GCAAGCCCGT GGTGCTGTGC GCCAACAAGG TCGACGGGCC GCGCGCCGAG
GCTGACGCCT CGGAGCTGTG GAGCCTGGGC CTCGGCGAGC CGCACCCCGT CTCGGCCCTG
CACGGCCGTG GCACCGGTGA CCTGCTCGAC GCCGCGATGC GCAAGCTCCC CACCAAGACC
GAGCACGGCG TGGCCGTCCC GAACGGCCCG CGCCGCGTGG CCCTCGTCGG CCGCCCGAAC
GTCGGCAAGT CGTCGCTCCT CAACAAGGTC GCCGGCTCCA ACCGCGTCGT CGTCGACCCG
ACCGCCGGGA CGACCCGCGA CCCGGTCGAC GAGCTCATCC AGCTCAAGGG CAAGGACTGG
GTGTTCGTCG ACACCGCAGG TATCCGTCGC CGCGTGCACC AGACGCAGGG TGCGGACTTC
TACGCGTCGC TGCGCACGCA AGCCGCGATC GAGAAGGCCG AGGTGGCCGT GGTGCTCCTC
GACGCGAGCG AGAAGCTCAC CGAGCAGGAC ACCCGCGTGA TCTCGCAGGT CATCGACTCC
GGTCGGTCTG TGGTCATCGC GTACAACAAG TGGGACCTCA TGGACGAGGA CCGTCGTCCG
TTCCTCGAGC GTGAGATCGA GAAGGACCTC GTGCAGGTCC AGTGGGCGCC GCGCGTCAAC
ATCTCGGCCG CGACCGGCTG GCACACCGAC CGTCTGGTGC CGGCCCTCGA GCGTTCGCTC
GAGTCCTGGG ACACCCGCAT CTCGACGGGT CGCCTGAACT CGTTCATGGG TGAGCTCGTC
GCCGCCAACC CGCACCCGCT GCGTGGTGGC AAGCAGCCGC GCATCCTCTT CGCGACGCAG
GCGTCGACGC GCCCGCCGCG CTTCGTCATC TTCGCCACCG GGTTCCTCGA GGCCGGCTAC
CGCCGCTTCA TCGAGAGGCG CCTGCGCGAG ACCTTCGGCT TCGAGGGCTC GCCCATCTCC
ATCTCGGTGC GCGTCCGCGA GAAGCGCAAG CGCTGA
|
|---|
| Protein sequence | MSTPEQNLSE DTATTADPTS APQPTSDVPE SAQTESSETT QPQVPLSDGT ESDGDDAQRE
HALRVGLEEY ELGDEDLALL GGEFDDGSGE GVGVPLPVLA VVGRPNVGKS TLVNRIIGRR
EAVVEDKPGV TRDRVSYPAE WGGRRFMLVD TGGWEVDVAG IEARVAEQAE VAISLADAVM
FVVDATVGPT ATDEQVVKLL RKSGKPVVLC ANKVDGPRAE ADASELWSLG LGEPHPVSAL
HGRGTGDLLD AAMRKLPTKT EHGVAVPNGP RRVALVGRPN VGKSSLLNKV AGSNRVVVDP
TAGTTRDPVD ELIQLKGKDW VFVDTAGIRR RVHQTQGADF YASLRTQAAI EKAEVAVVLL
DASEKLTEQD TRVISQVIDS GRSVVIAYNK WDLMDEDRRP FLEREIEKDL VQVQWAPRVN
ISAATGWHTD RLVPALERSL ESWDTRISTG RLNSFMGELV AANPHPLRGG KQPRILFATQ
ASTRPPRFVI FATGFLEAGY RRFIERRLRE TFGFEGSPIS ISVRVREKRK R
|
|---|
| |