Gene Sked_18930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_18930 
Symbol 
ID8633528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2101278 
End bp2102126 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content75% 
IMG OID 
Product4-hydroxybenzoate polyprenyltransferase-like prenyltransferase 
Protein accessionYP_003314652 
Protein GI269795197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.401268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.230384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCA CGCTCCGCTC GCTCCTGCTG TCCAGCCACC CCGGACCGAC CGCCACGGTC 
ACCGTCCTCG CCGTCGTCCT CGGGGCAGGC AGCGGGCTCG GGCCCGGACG CGTCGTGCTG
CTCGGCGTGG CCTTCCTCCT CGGGCAGCTC TCGATCGGGT TCTCCAACGA CTGGGTCGAC
GCCGCGCGCG ACCGGGCCGT CGAGCGTCGC GACAAGCCGG TCGCCCGTGG TGACGTCTCG
GTCACCACGG TCCGCACCGC CGCGTGGGTC ACCGCGGCGC TCACGGTCCC GGCGTCCTTC
GGGCTGGGCT GGCAGGCCGC GGTCGCGCAC CTGGTGCTGG TGGCCTCCGG CTGGGCCTAC
AACCTCGGGC TCAAGCGCAC CGCGTGGTCC GTGGCACCCT TCGTCCTGAG CTTCGGGCTG
CTCCCTGCCG TGGTCACCCT CGCCGCCCAG CCCCCGGCCG TCGCCGCACC GTGGGCGCTG
GCCGTCGGTG GCGTCTTCGG TGTCGCCATC CACTTCACCA ACGTGCTCCC AGACCTCGAG
GACGACGCCA CGACGGGCGT CGACGGGCTG CCGCACCGGC TGGGGCGTGT GGTCTCCGGC
GTGGTGGCCT TCGTCGCGCT GGCCGTCGCC GCGCTGCTCG TGGTCCTCGG ACCGGTGCTC
GCCGGGACGA GCGACGCCCC CGGGCCGCTG GCCCTCGTCG CGCTCGGCGT CTGCCTGGCC
GTCGCGACCG CCGGGGTCGT CCTCGTGGTG ACGCGGCCGC CGGGGCGGCT GCTGTTCCAG
CTCATCATCG TCGCGTCGCT CGTCGTCGCC GCGCAGCTCG CGCTGTCCGG GACGGTGCTC
ACGGCGTGA
 
Protein sequence
MLATLRSLLL SSHPGPTATV TVLAVVLGAG SGLGPGRVVL LGVAFLLGQL SIGFSNDWVD 
AARDRAVERR DKPVARGDVS VTTVRTAAWV TAALTVPASF GLGWQAAVAH LVLVASGWAY
NLGLKRTAWS VAPFVLSFGL LPAVVTLAAQ PPAVAAPWAL AVGGVFGVAI HFTNVLPDLE
DDATTGVDGL PHRLGRVVSG VVAFVALAVA ALLVVLGPVL AGTSDAPGPL ALVALGVCLA
VATAGVVLVV TRPPGRLLFQ LIIVASLVVA AQLALSGTVL TA