Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_18930 |
Symbol | |
ID | 8633528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2101278 |
End bp | 2102126 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase |
Protein accession | YP_003314652 |
Protein GI | 269795197 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.401268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.230384 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGCCA CGCTCCGCTC GCTCCTGCTG TCCAGCCACC CCGGACCGAC CGCCACGGTC ACCGTCCTCG CCGTCGTCCT CGGGGCAGGC AGCGGGCTCG GGCCCGGACG CGTCGTGCTG CTCGGCGTGG CCTTCCTCCT CGGGCAGCTC TCGATCGGGT TCTCCAACGA CTGGGTCGAC GCCGCGCGCG ACCGGGCCGT CGAGCGTCGC GACAAGCCGG TCGCCCGTGG TGACGTCTCG GTCACCACGG TCCGCACCGC CGCGTGGGTC ACCGCGGCGC TCACGGTCCC GGCGTCCTTC GGGCTGGGCT GGCAGGCCGC GGTCGCGCAC CTGGTGCTGG TGGCCTCCGG CTGGGCCTAC AACCTCGGGC TCAAGCGCAC CGCGTGGTCC GTGGCACCCT TCGTCCTGAG CTTCGGGCTG CTCCCTGCCG TGGTCACCCT CGCCGCCCAG CCCCCGGCCG TCGCCGCACC GTGGGCGCTG GCCGTCGGTG GCGTCTTCGG TGTCGCCATC CACTTCACCA ACGTGCTCCC AGACCTCGAG GACGACGCCA CGACGGGCGT CGACGGGCTG CCGCACCGGC TGGGGCGTGT GGTCTCCGGC GTGGTGGCCT TCGTCGCGCT GGCCGTCGCC GCGCTGCTCG TGGTCCTCGG ACCGGTGCTC GCCGGGACGA GCGACGCCCC CGGGCCGCTG GCCCTCGTCG CGCTCGGCGT CTGCCTGGCC GTCGCGACCG CCGGGGTCGT CCTCGTGGTG ACGCGGCCGC CGGGGCGGCT GCTGTTCCAG CTCATCATCG TCGCGTCGCT CGTCGTCGCC GCGCAGCTCG CGCTGTCCGG GACGGTGCTC ACGGCGTGA
|
Protein sequence | MLATLRSLLL SSHPGPTATV TVLAVVLGAG SGLGPGRVVL LGVAFLLGQL SIGFSNDWVD AARDRAVERR DKPVARGDVS VTTVRTAAWV TAALTVPASF GLGWQAAVAH LVLVASGWAY NLGLKRTAWS VAPFVLSFGL LPAVVTLAAQ PPAVAAPWAL AVGGVFGVAI HFTNVLPDLE DDATTGVDGL PHRLGRVVSG VVAFVALAVA ALLVVLGPVL AGTSDAPGPL ALVALGVCLA VATAGVVLVV TRPPGRLLFQ LIIVASLVVA AQLALSGTVL TA
|
| |