Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_18400 |
Symbol | |
ID | 8633475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2046155 |
End bp | 2048542 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Excinuclease ATPase subunit |
Protein accession | YP_003314600 |
Protein GI | 269795145 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.251119 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA GGACCACGGG CGCCAGCACA GGGCTGCACG CTGCCGACAC GCACGACCTC ATCCGGGTGC GGGGCGCGCG GGAGAACAAC CTCCAGGACG TGAGCCTGGA CCTGCCCAAG CGACGCCTCT CGGTGTTCAC GGGGGTGTCG GGCTCGGGCA AGAGCTCTCT GGTGTTCGCG ACCATCGCGG CCGAGTCGCA GCGGATGATC AACGAGACCT ACAGCGCGTT CCTGCAGGGG TTCATGCCGA GCCAGGCGCG GCCGGACGTC GACCTGCTGG AGGGGCTCAC CACGGCGATC ATCGTCGACC AGGAGCGCAT GGGCGCGAAC TCGCGGTCGA CGGTGGGCAC GGCGACGGAC GTCAACGCGA TGCTGCGCAT CGTGTTCAGC CGGCTCGGTG AGCCGTACGT CGGGTCGCCG CAGGCCTTCT CCTTCAACGT CGCCTCGATC AGCGGTGCGG GTGCCGTGAC GACCGAGAAG GCCGGCCGGA CCATCAAGGA GCGGCGCAGC TTCACGGTCA CCGGCGGGCA GTGCTCACGG TGCGAGGGCA TGGGGACGGT CAACGACATC GACCTCACGC AGCTCTTCGA CGACTCGAAG TCCCTCTCGG AGGGGGCGCT GACCATCCCG GGCTACACGG CGGACGGGTG GGGCGTGAAG ATCTTCACCG GGTCGGGGTT CCTCGACCCG GACAAGGCGA TCCGCGACTA CACCGCGAAG GAGCGGGACG CGTTCCTCTA CAAGGAGCCG GTCAAGGTCA AGGTCGGCGA CATCAACATG ACGTACGAGG GCCTGGTGCC CAAGGTGCAG AAGTCCTTCC TGTCGAAGGA CCGCGAGGCG ATGCAGCCGC ACATCCGGGC CTTCGTCGAC CGGGCGGTCA CCTTCACCAC CTGCCCGGAC TGCCAGGGCA CGCGTCTCAA CGAGGGTGCC CGGTCCTCGC GGGTGCACGG GCTGAACATC GCCGAGGCGT GCTCGATGCA GATCAGCGAC CTCGCGACCT GGGTCACGGG CCTCGAGGAG CCGTCGATGA CGCCGCTGCT CGACGCGCTG CGCGACACGC TGGACTCCTT CGTCGAGATC GGTCTCGGGT ACCTGTCACT CGACCGGCCG GCGGGGACGC TGTCCGGGGG AGAGGCGCAG CGCACCAAGA TGATCCGCCA CCTCGGCTCC TCCCTGACCG ACGTGACGTA CGTGTTCGAC GAGCCCACCA TCGGGCTGCA CCCGCACGAC ATCCAGCGCA TGAACCGGCT GCTGCTGCAG CTGCGCGACA AGGGCAACAC GGTGCTCGTC GTCGAGCACA AGCCGGAGAT GATCACGATC GCCGACCACG TCGTCGACAT CGGTCCCGGC GCCGGGACCG CGGGCGGGGA GATCTGCTAC GAGGGCACCG TCGAGGGTCT CCGGTCGAGC GGCACGCTCA CCGGGCGCCA CCTCGACGAC AGGTCGCGGG TGAAGGACTC GGTCCGTCCG CACCGGGGGG CGATCGAGAT CCGGGGCGCG ACCGCCAACA ACCTCACGGG TGTCGACGTG GACATCCCGC TCGGCGTGCT CGTCGTGGTG ACCGGTGTCG CCGGGTCGGG GAAGAGCTCG CTGGTGCACG GGTCGATCCC GCACGGTGCG GGGGTCGTCT CGATCGACCA GGCGACGATC CGCGGGTCGC GCCGCAGCAA CCCGGCGACG TACACGGGTC TGCTGGAGCC GATCCGCAAG GCCTTCGCCA AGGCCAACGG GGTCAAGCCG GCGCTGTTCA GCGCGAACTC CGAGGGCGCC TGCCCGGTGT GCAACGGCAA CGGGGTGATC TACACCGACC TCGGTGTCAT GGCGAGCGTC TCGTCGCCCT GCGAGGTGTG CGAGGGCAAG CGGTTCCAGG CGTCGGTCCT CGAGTACCAC CTCGGTGGGC GCGACATCAG CGAGGTGCTC GCCATGTCCG TCGCCGAGGC CGAGGAGTTC TTCGGTGCGG GCGACGCCCG CACCCCCGCG GCGCACGCCG TCCTCGTGCG GCTGGTCGAC GTGGGCCTGG GCTACCTACG CCTCGGGCAG CCGCTGACCA CGCTGTCCGG CGGCGAGCGC CAGCGCCTCA AGCTGGCGAC GCACATGGCG GAGAAGGGCG ACGTGTACGT CCTCGACGAG CCCACCACCG GCCTGCACCT GGCCGACGTC GAGCAGCTCC TCGGGCTGCT CGACCGCCTC GTCGACTCCG GGAGGTCCGT GATCGTGGTG GAGCACCACC AGGCCGTCAT GGCGCACGCC GACTGGATCA TCGACCTCGG TCCGGGCGCC GGGCACGACG GCGGCAAGGT CGTGTTCCAG GGCACCCCGG CCGACCTCGT CGCGCAGCGC TCGACGCTCA CGGGGGAGCA CCTCGCGGAG TACGTGCAGG GCACATGA
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Protein sequence | MSTRTTGAST GLHAADTHDL IRVRGARENN LQDVSLDLPK RRLSVFTGVS GSGKSSLVFA TIAAESQRMI NETYSAFLQG FMPSQARPDV DLLEGLTTAI IVDQERMGAN SRSTVGTATD VNAMLRIVFS RLGEPYVGSP QAFSFNVASI SGAGAVTTEK AGRTIKERRS FTVTGGQCSR CEGMGTVNDI DLTQLFDDSK SLSEGALTIP GYTADGWGVK IFTGSGFLDP DKAIRDYTAK ERDAFLYKEP VKVKVGDINM TYEGLVPKVQ KSFLSKDREA MQPHIRAFVD RAVTFTTCPD CQGTRLNEGA RSSRVHGLNI AEACSMQISD LATWVTGLEE PSMTPLLDAL RDTLDSFVEI GLGYLSLDRP AGTLSGGEAQ RTKMIRHLGS SLTDVTYVFD EPTIGLHPHD IQRMNRLLLQ LRDKGNTVLV VEHKPEMITI ADHVVDIGPG AGTAGGEICY EGTVEGLRSS GTLTGRHLDD RSRVKDSVRP HRGAIEIRGA TANNLTGVDV DIPLGVLVVV TGVAGSGKSS LVHGSIPHGA GVVSIDQATI RGSRRSNPAT YTGLLEPIRK AFAKANGVKP ALFSANSEGA CPVCNGNGVI YTDLGVMASV SSPCEVCEGK RFQASVLEYH LGGRDISEVL AMSVAEAEEF FGAGDARTPA AHAVLVRLVD VGLGYLRLGQ PLTTLSGGER QRLKLATHMA EKGDVYVLDE PTTGLHLADV EQLLGLLDRL VDSGRSVIVV EHHQAVMAHA DWIIDLGPGA GHDGGKVVFQ GTPADLVAQR STLTGEHLAE YVQGT
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