Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_17940 |
Symbol | |
ID | 8633430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 2000007 |
End bp | 2001380 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | arabinose efflux permease family protein |
Protein accession | YP_003314555 |
Protein GI | 269795100 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACTG TCGAACGCCG CGTCCTCGTC GTCGCGATCC TCGCGTCCTT CGTCGTGTTC CTCGACGGCT CGGTGGTCAA CGTGGCGCTG CCGGCGATCG CGGGTGAGCT CGACGGGGGA GTCCTCGACG GGCTCGCGCT CCAGCAGTGG GTGGTCGACG CGTACCTCGT GACGCTCGGC GCCCTCATCC TCGTCGCCGG CTCGCTCTCC GACGTCTTCG GCCGGCGGCG CGTCCTCACC TGGGGACTGG TCGGCTTCGG CATCACCTCG CTGCTCTGCG CCCTCGCCCC GACGGGCCTC GTACTCGTCG TAGCCCGCGC GCTCCAGGGA GCAGCAGGGG CGCTGCTCGT CCCCAGCTCC CTCGCCATGA TCGTCGCGAC CTTCCGCGGC GAGGCCCAGG GGAAGGCGAT CGGGACCTGG ACCGCGTGGA CCGGGACGGC GATGATCGCC GGCCCGCTCC TCGGCGGGAT CCTCGTCGAC ACCGCCTCCT GGCGGTGGGT CTTCGCCGTG AACGTCGTGC CGGTCGCGCT CACCGTCTGG CTGGTCCGCT CGACACCTGG GGGAGCGCGC GACACGTCAC GCCGCGTCGA CGTCGTCGGG GCCGCGCTCG TCGCCCTCGG GCTCGCCGGG ACAGTCTTCG CGCTCATCGA GCAGGGGCGG CTCGGGTGGT CCGCACCGCT CGTCTGGGCG CCGCTCGTGC TCGGGGTGAC CGCGCTCGTC GCCTTCGTCC TCTGGGAACG ACGCGCCCCG GACCCCGTGC TGCCGCTGCG GCTCTTCGCC GTCCGCAACT TCTCCGCCGG CAACCTCACG ACCGCAGCGG TCTACGGCGC GCTGGCCTTC GGCGGCTTCG TCCTCGTGCT CTTCCTCCAG CAGGTCGCCG GCTACAGCGC GACGGCAGCC GGGCTCTCGA TGCTCCCGGT CACCCTGCTC ATGCTCGCCC TGTCCTCCCG CGCAGGCGCC CTGGCGGGGC GCTACGGTGC GCGGGTCTTC ATGACCGTCG GCCCGCTCGT CGCCTCCGCG GGGTACCTGC TCATGCTCAC CACCACCGAG GAGGCCGTCT ACCTCACGCA GATCCTGCCC GGGGTGCTGC TGTTCGGTCT CGGGCTGGCA GCGACCGTCG CGCCGCTCAC CGCCGCCATC CTCGCCTCGA TCCCGGCCGA GGACGCCGGG ATCGGCTCGG CAGTCAACAA CGCGGTCTCC CGGGTGGCCG GGCTGGTGGT CATCGCCTGC GCCGGCGTGG TGATCGGCCC GACCCTCGAC CTCGCCGGCT TCCACCGCGC CCTCGTCCTC ACCGCGGTCC TCCTCGCCCT CGGCGGCGTC GTCAGCTGGC TCGGCATCCG CGACGGTGCC CGTGCGCCTG ACCGGGCTCC CTGA
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Protein sequence | MTTVERRVLV VAILASFVVF LDGSVVNVAL PAIAGELDGG VLDGLALQQW VVDAYLVTLG ALILVAGSLS DVFGRRRVLT WGLVGFGITS LLCALAPTGL VLVVARALQG AAGALLVPSS LAMIVATFRG EAQGKAIGTW TAWTGTAMIA GPLLGGILVD TASWRWVFAV NVVPVALTVW LVRSTPGGAR DTSRRVDVVG AALVALGLAG TVFALIEQGR LGWSAPLVWA PLVLGVTALV AFVLWERRAP DPVLPLRLFA VRNFSAGNLT TAAVYGALAF GGFVLVLFLQ QVAGYSATAA GLSMLPVTLL MLALSSRAGA LAGRYGARVF MTVGPLVASA GYLLMLTTTE EAVYLTQILP GVLLFGLGLA ATVAPLTAAI LASIPAEDAG IGSAVNNAVS RVAGLVVIAC AGVVIGPTLD LAGFHRALVL TAVLLALGGV VSWLGIRDGA RAPDRAP
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