| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_17760 |
|---|
| Symbol | |
|---|
| ID | 8633412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1983198 |
|---|
| End bp | 1984448 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | type II secretory pathway, component PulF |
|---|
| Protein accession | YP_003314537 |
|---|
| Protein GI | 269795082 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.874552 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCGA CAGACGTCAA GACAGCCTCG GGCAAGCGGA CCTTCGAGTA CACGGTCCGC
GACTCGAAGG GGAAGATCGT CAAGGGGCGG ATCGAGGCCC TGGACCAGGG TGCGGTCGCC
TCTCGTCTGA AGACCATGAA CCTCGTCCCG CTCTCGGTCA CCGAGATCAA GACGACGGGC
CTTCAGCAGG AGATCAACAT CCCGGGGATC TCTGATCGGA TCGGGCTGTC CGACCTCGCG
ATCATGGCGC GTCAGATGGC GACGATGGTC TCGGCCGGTC TCTCGCTCAT CCGCACCCTC
GGGATCCTCG CGGACCAGAC GGAGAACAAG CCGCTCGCCA AGGTTCTCGG CATCGTGAGG
TCCGATGTCG AGACCGGGCT GTCGCTCTCC AACGCACTGG TCAAGCACCC CGAGGCGTTC
CCGCCGATCA TGGTCAACAT CGTCCGTGCT GGCGAGACCG GCGGGTTCCT CGAGAAGTCG
CTGCTCTCCG CCGCTGACAA CTTCGAGGCC GAGGTGAAGC TGCGCGCCAA GGTGAAGTCG
GCCATGACGT ACCCGGTGGT CGTGCTGTTC ATCGCGATCG CCGCGGTGAT CGGCATGCTC
CTGTTCATCG TGCCGATCTT CAAGGACATG TTCGAGGGCC TCGGTGGAGA GCTCCCGGCG
CCGACGCAGT TCCTCGTGCT GCTGTCGTCG TGGATGAAGT GGCTGCTGCC GCTCGTGCTG
GTGGTCTCCG CGGTGGTCGG GATCTGGTGG CAGCGGCACA AGAACGACGA GGAGGTCCGG
TCGAAGTCCG ACCCCTTCAA GCTCAAGCTG CCCGTGTTCG GCAAGCTCTT CCAGAAGATC
GCCATCGCCC GCTTCACCCG CAACTTCTCG ACGATGCTCG GGGCGGGGGT GCCGATCCTC
CAGGCGCTGG ACATCGTCGG CAGCACCTCG GGGAACTGGG CGATCGAGAA CGCGCTGCGG
GACGTCGAGA AGTCGGTGCG CACCGGTGAG TCCTTGTCCG GTCCGCTCGC GCACCACGAC
GTGTTCCCGC CCATGGTCAC GCAGATGATC GCGGTCGGCG AGGACGCCGG GTCGATGGAG
CTCATGCTCG CGAAGATCTC GGAGTTCTAC GACCAAGAGG TCGAGTCCAC CACCGAACAG
CTGACGTCGC TCCTCGAGCC GCTCATGATC GTGTTCCTCG GGGCCATCAT CGGCGGCATG
ATCATCGCCC TCTACATGCC GATCTTCAAG ATCTTCGATC TCATGGGGTG A
|
|---|
| Protein sequence | MASTDVKTAS GKRTFEYTVR DSKGKIVKGR IEALDQGAVA SRLKTMNLVP LSVTEIKTTG
LQQEINIPGI SDRIGLSDLA IMARQMATMV SAGLSLIRTL GILADQTENK PLAKVLGIVR
SDVETGLSLS NALVKHPEAF PPIMVNIVRA GETGGFLEKS LLSAADNFEA EVKLRAKVKS
AMTYPVVVLF IAIAAVIGML LFIVPIFKDM FEGLGGELPA PTQFLVLLSS WMKWLLPLVL
VVSAVVGIWW QRHKNDEEVR SKSDPFKLKL PVFGKLFQKI AIARFTRNFS TMLGAGVPIL
QALDIVGSTS GNWAIENALR DVEKSVRTGE SLSGPLAHHD VFPPMVTQMI AVGEDAGSME
LMLAKISEFY DQEVESTTEQ LTSLLEPLMI VFLGAIIGGM IIALYMPIFK IFDLMG
|
|---|
| |