Gene Sked_17450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17450 
Symbol 
ID8633381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1945535 
End bp1946743 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content73% 
IMG OID 
ProductPhosphatidylinositol alpha-mannosyltransferase 
Protein accessionYP_003314506 
Protein GI269795051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.792945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.169163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGC GAAGCCTGAG GGTCGGGATC GTCTGCCCGT ACTCCTTCGA CGTCCCCGGG 
GGCGTCCAGT TCCACATCCG TGACCTCGCC GAGGCGCTCA TGGCCCAGGG GCACACCGTC
TCCGTGCTCG CGCCCGCCGA CGAGGACACC CCCATCCCGG ACTACATCAC GTCGGCCGGC
AAGGCGATCC CGGTCAAGTA CAACGGGTCC GTCGCCCGGA TGACCTTCGG GCCGCGCACC
GCCGCCAAGG TGCGCCGCTG GCTCAAGGAG GGGCAGTTCG ACGTCCTGCA CCTCCACGAG
CCGGTCACCC CGAGCCTGAG CATGCTCGCG CTGTGGATCG CCCGCGGGCC CATCGTGGCG
ACCATGCACA CGGCGCTCAT CCGGTCGCGC GCGCTGCAGG CCGCCTACCC CCTCGTGCGG
CAGAGCCTCG AGAAGATCTC CGCGCGCATC GCGGTGTCCG AGGACGCCCG GCGCACGCTC
GTCGAGCACA TGGGCGGCGA TGCCGTGGTG ATCCCCAACG GGGTCTACGT CGACACCTTC
GAGCAGGCCG AGGCCGACCC ACGCTGGGTG GGCACCGCCG AGGCGCCGAC CATCGCGTTC
CTCGGGCGCC TCGACGAGCC GCGCAAGGGC CTGCCGGTCC TCACCCGTGC TGTCCCGGAG
ATCCTCCGCG CCGTCCCCGG TGCGCGGTTC CTGGTGGCCG GGCGCGGCGA CGACGGCCGT
GACGCCGCCC TCGCCGAGCT CGGCGAGCAC GCCTCCTCGG TCGAGTTCCT CGGGTCGATC
ACCGACGAGG ACAAGGCCGC GCTGCTGTCC TCGGTCGACC TCTACATCGC GCCGCAGACC
GGGGGCGAGA GCTTCGGCAT CGTGCTGGTC GAGGCCATGA GCGCCGGCGC CTGCGTGGTC
GCGAGCGACC TCGGCGCCTT CGAGCGGGTC CTCGACGACG GGCGCGCCGG CTACGTGTTC
CAGGTGGGTG ACAGCGCCGA CCTCGCACGC ACCGTCCTGC AGGCCCTGTC CGACCCGGAG
GAGCGTGCGC GACGCACGGC CCTGGCCTCG ACGGCGGTGC GCCAGTACGA CTGGTCGACG
GTCACCAGCC AGGTGCTCAC GGTCTACGAG ATGGTCCTCG AGGCCTCGCG CGCCCTCGGC
GGCGTCGAGG AGGACCCGAC CTCCGTCACC GGCAGGCGAC GTGGCGGCCG GACGGAGGTG
GCCCGATGA
 
Protein sequence
MPTRSLRVGI VCPYSFDVPG GVQFHIRDLA EALMAQGHTV SVLAPADEDT PIPDYITSAG 
KAIPVKYNGS VARMTFGPRT AAKVRRWLKE GQFDVLHLHE PVTPSLSMLA LWIARGPIVA
TMHTALIRSR ALQAAYPLVR QSLEKISARI AVSEDARRTL VEHMGGDAVV IPNGVYVDTF
EQAEADPRWV GTAEAPTIAF LGRLDEPRKG LPVLTRAVPE ILRAVPGARF LVAGRGDDGR
DAALAELGEH ASSVEFLGSI TDEDKAALLS SVDLYIAPQT GGESFGIVLV EAMSAGACVV
ASDLGAFERV LDDGRAGYVF QVGDSADLAR TVLQALSDPE ERARRTALAS TAVRQYDWST
VTSQVLTVYE MVLEASRALG GVEEDPTSVT GRRRGGRTEV AR