Gene Sked_17320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17320 
Symbol 
ID8633368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1934016 
End bp1935254 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content76% 
IMG OID 
Productpredicted acetamidase/formamidase 
Protein accessionYP_003314493 
Protein GI269795038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00772804 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.101325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGCA CCGAGACGAT GTCCAGCAGC GAGACCGCGG CGGCGCCGTC CCTCCCGGGG 
GCGGCGCCGT CCGTCGCGTC CGGCGTGCGC GTCATGCAGC CGCTCGGCGA CCGGCCGGTC
GCACCGTCCG ACGTCCCGGG GTACCTCCCG GCGACGCCGG AGACGGTGCT GTGGGGCCGG
CTGCCGTGCG CGTCCGACTC CCCCGTGCTG AGCGTCGACC CGGGCCAGGA GGTCTGGGTC
GACACGGTGA GCCACGAGGG GATCCTCGAG GACCAGGGCC GCGACCCGGT GGCGTTCTTC
ACCGGGCACG GCGTGCCGGG CGAGGACGTG CTCGACGACG CGGTCCGGGT GGCCCGGGAG
GTCGCCCACG ACCCCGCGGT CGACGGTCCG CACGTGGTCA CCGGACCGGT CGAGGTCCGC
GGCGCCCTGC CCGGTGACGT GCTGTCGGTG ACCGTCGTGG ACCTGCGCCT GCGTGCCGGG
TACGGGGTCG TGTCGAGCCG GCACGGGCGC GGTGCCCTCC CGGGAGAGAT GCCCGACCCG
CGCTCGCCCG GTCCGGTCTC GCTCCTGTGC ACGGTCGAGG ACGGCCCGGA CGGCCTCTCC
GGCTCCCTCC CCGCCGGGCC TGGCGACCCG CGCCGGGTGC GGTTCCCGCT CGCCCCGTTC
CTCGGGACGA CCGGGGTCGC GGTCGCCGGT GGCACCCGCC CCCACTCCGT CCCACCGGGG
CAGCACGGGG GCAACCTCGA CGTCTCCGTG CTCGGGGTCG GGTCGACCCT GCACCTGCCC
GTCCAGGTGC CCGGCGCCCT CGCCTACGTG GGCGACCCGC ACTTCAGCCA GGGTGACGGG
GAGGTCGCGC TCACCGCCTT CGAGGCGCCG CTGCGCGCCC TGCTGCGCTT CGACCTCGTC
CGGCAGGGCG ACGCGCACGG CGCGGGCGAC GCGTCCGCGA GCGCGCCAGG TCCCACGACT
ACCCCGGGTC CGACCGGACC GTGGGCGGAG ACCGACGAGC TGCTCGTGGC GATCGGTCTG
GACGCCGACC TCGGTGAGGC GGTGCGCGAC GCCACGCGGT GCGCTCTCGC GCTCCTCGAG
CGGGAGGGGA TGCACCCCGC CCACGCCTAC GCCTATCTCT CGGCGGCCGG TGACTTCGCC
GTGTCGCAGG TGGTCGACCA GGTGTGCGGG GTCCACGGGA CCATCCGCAA GGCCGACCTC
CGTGAGCTCC GGGGACCTTC GGCTCCCCCG CAGGTCTGA
 
Protein sequence
MTSTETMSSS ETAAAPSLPG AAPSVASGVR VMQPLGDRPV APSDVPGYLP ATPETVLWGR 
LPCASDSPVL SVDPGQEVWV DTVSHEGILE DQGRDPVAFF TGHGVPGEDV LDDAVRVARE
VAHDPAVDGP HVVTGPVEVR GALPGDVLSV TVVDLRLRAG YGVVSSRHGR GALPGEMPDP
RSPGPVSLLC TVEDGPDGLS GSLPAGPGDP RRVRFPLAPF LGTTGVAVAG GTRPHSVPPG
QHGGNLDVSV LGVGSTLHLP VQVPGALAYV GDPHFSQGDG EVALTAFEAP LRALLRFDLV
RQGDAHGAGD ASASAPGPTT TPGPTGPWAE TDELLVAIGL DADLGEAVRD ATRCALALLE
REGMHPAHAY AYLSAAGDFA VSQVVDQVCG VHGTIRKADL RELRGPSAPP QV