Gene Sked_17080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17080 
Symbol 
ID8633344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1907303 
End bp1907878 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content69% 
IMG OID 
ProductRNA polymerase, sigma subunit, ECF family 
Protein accessionYP_003314469 
Protein GI269795014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.458318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAACC CGAGGACGAG TGAACCCGAC GCCATCGACG CGGCGCTGCA TGCCTGCGCC 
AGCGGTGACC CGGCGCTCTT CGCACCCGTC TACGACTCGC TCGCGCCTGC CGCCTACGGA
ACGGCTCTCG GAGTGCTCCG TGACCCGGAC CACGCCGCAG AGGTGACTCA AGAGGTGATG
GTCGAGGTGT GGCAGACAGC TGCACGCTTC GACCCCAGCC GTGGGTCCGC CCGGACGTGG
GTGGTCACGC TCGCGCGACG TCGTGCCGTA GACAGGGTCC GTTCAGAGCA AGCCCGACGA
ACCCGTGACC AGAAGGACAC GGACCAGAAG GGTGCAGGAG GTGAGTACGA CGTGGTTGCC
GAGCACGTGG AGCAGCGGCT CGAGGCCGCA GGCGTCCGCA GGTGCCTGGG GTCCCTGACC
GACACCCAGC GCGACGCCGT CATGCGCGCC TACTACGGAG ACCGTACCTA CCGAGAGGTG
GCCGAAGACC TCGGCGCCTC CCTCCCGACC GTCAAGAGCC GCATCCGAGA CGGCCTCATC
CGACTGCGCA ACTGCTTGGG GGTGGACCAT GGCTGA
 
Protein sequence
MPNPRTSEPD AIDAALHACA SGDPALFAPV YDSLAPAAYG TALGVLRDPD HAAEVTQEVM 
VEVWQTAARF DPSRGSARTW VVTLARRRAV DRVRSEQARR TRDQKDTDQK GAGGEYDVVA
EHVEQRLEAA GVRRCLGSLT DTQRDAVMRA YYGDRTYREV AEDLGASLPT VKSRIRDGLI
RLRNCLGVDH G