Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_17080 |
Symbol | |
ID | 8633344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1907303 |
End bp | 1907878 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | RNA polymerase, sigma subunit, ECF family |
Protein accession | YP_003314469 |
Protein GI | 269795014 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.458318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGAACC CGAGGACGAG TGAACCCGAC GCCATCGACG CGGCGCTGCA TGCCTGCGCC AGCGGTGACC CGGCGCTCTT CGCACCCGTC TACGACTCGC TCGCGCCTGC CGCCTACGGA ACGGCTCTCG GAGTGCTCCG TGACCCGGAC CACGCCGCAG AGGTGACTCA AGAGGTGATG GTCGAGGTGT GGCAGACAGC TGCACGCTTC GACCCCAGCC GTGGGTCCGC CCGGACGTGG GTGGTCACGC TCGCGCGACG TCGTGCCGTA GACAGGGTCC GTTCAGAGCA AGCCCGACGA ACCCGTGACC AGAAGGACAC GGACCAGAAG GGTGCAGGAG GTGAGTACGA CGTGGTTGCC GAGCACGTGG AGCAGCGGCT CGAGGCCGCA GGCGTCCGCA GGTGCCTGGG GTCCCTGACC GACACCCAGC GCGACGCCGT CATGCGCGCC TACTACGGAG ACCGTACCTA CCGAGAGGTG GCCGAAGACC TCGGCGCCTC CCTCCCGACC GTCAAGAGCC GCATCCGAGA CGGCCTCATC CGACTGCGCA ACTGCTTGGG GGTGGACCAT GGCTGA
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Protein sequence | MPNPRTSEPD AIDAALHACA SGDPALFAPV YDSLAPAAYG TALGVLRDPD HAAEVTQEVM VEVWQTAARF DPSRGSARTW VVTLARRRAV DRVRSEQARR TRDQKDTDQK GAGGEYDVVA EHVEQRLEAA GVRRCLGSLT DTQRDAVMRA YYGDRTYREV AEDLGASLPT VKSRIRDGLI RLRNCLGVDH G
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