| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_17050 |
|---|
| Symbol | |
|---|
| ID | 8633341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1903184 |
|---|
| End bp | 1903882 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | signal peptidase I |
|---|
| Protein accession | YP_003314466 |
|---|
| Protein GI | 269795011 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0856146 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.95048 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACG CGTCCCGGGC ACCGGGACGC GTCCAACAGG TCTGCCTGAA CGTCGCCTGC
GCCGTCGGCG TCCTGGTGAT CGTCTGGTTC CTCCTGTCCG TGCTGCTCGG GTGGTCGCTC
GTGCTGTTCA AGACCGGCTC GATGGCGCCG ACGTACCCCA CCGGCGCTGC CGGGATCGCG
GTCCCGGTGG ATGCCGAGCA GATCGAGACC GGCGACGTCG TCACCGTGCC CCGGGCCGAG
GGGGGCCTGC CGGTGACGCA CCGCGTCGTG TCGGTCGACG ACCCGGGGAC GGGGGACGGC
TCCCGCGAGC TCGTGCTCCA GGGCGACGAC AACGCGAACC CCGACCGTGA GGTCTACACG
GTCACGGAGG CCGACAAGGT GCTCGTCGGG GCCCCCTACG TCGGGTACGC CGTGACCGTC
CTCGCCCAGC CGAAGACGCT GGCGATCCTC ACCGCGGCGA TGGCCGCGCT CACCGTCTGG
GTGTTCTGGC CCCGGGCGGA AGACCACGAC GAGGACGGGG ACGAGCGGCG CGACGAGGAC
GATGCCGCCG GCTCCGACGG CGGCCTTGCG GTGACGGGCG GCGAGCGGGT CACGGTGGCG
GCCGGGAGGA GCGGCGGGCC GACGCGCGCG ATGCTGCGGG AGCAGGAGCG CCACCACCGC
GGACGACGGG ACGGCTCCGG CCGCGAGAGT CCTCGCTGA
|
|---|
| Protein sequence | MTDASRAPGR VQQVCLNVAC AVGVLVIVWF LLSVLLGWSL VLFKTGSMAP TYPTGAAGIA
VPVDAEQIET GDVVTVPRAE GGLPVTHRVV SVDDPGTGDG SRELVLQGDD NANPDREVYT
VTEADKVLVG APYVGYAVTV LAQPKTLAIL TAAMAALTVW VFWPRAEDHD EDGDERRDED
DAAGSDGGLA VTGGERVTVA AGRSGGPTRA MLREQERHHR GRRDGSGRES PR
|
|---|
| |