Gene Sked_17020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17020 
Symbol 
ID8633338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1898203 
End bp1899243 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC-type Fe3+-hydroxamate transport system, periplasmic component 
Protein accessionYP_003314463 
Protein GI269795008 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.745589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCC TCCCCTCCTC GCGCCGCCCG GTGCTCGCGG CAGCGCTCGT CGCAGGGGCC 
GTCGTGCTCG CCGGCTGCGG GTCCTCCGAC AGCTCCGCCG AGACCACCCC GTCTGCGGCA
CCCGCCGACG GCGCCTTCCC CGTCACGGTC GAGAGCGCCC TCGGTGACGC CGTCATCGAC
GAGGCCCCGG AGCGGGTCGT CACCCTCGGC ATGGGGTCCG CCGAGACCGC GATCGCGCTC
GGCGTCACCC CCGTGGGGAT CGAGGAGTAC CCCTGGGGCT CCGACGACAC CGGCTACCTG
CCGTGGATCC ACGAGGCGCT CGAGGAGTCC GGCGAGGACC TCCCCGCGCA GTTCACCGGT
GGGACGGAGA TCGACATCGA GGCGATCCTC GAGCTCGAGC CCGACGTGAT CCTCGCCCCG
TGGTCGGGGA TCACCCAGGA GCAGTTCGAC ACGCTCTCCG AGATCGCACC GACGGTCGCC
TACCCGGACC TCGCGTGGAG CATCGACTGG GACCAGCAGA TCACGACCAT CGGGAAGGCC
CTCGGCCAGC CCGACGAGGC GCAGGAGCTG ATCACCGGCA TCGAGGAGCA GTTCACCGAG
GCCGCGGCCG CGCACCCCGA GTACGCCGAC GTGACCTTCT CGTACGTCTA CACCACCGAG
CCCGGCTCGC TCGGGGTGTT CCTGCCCGAC GAGCAGCGCG TCGCGATGGT CCGCGGGCTC
GGGCTCACCG TCGACCCCGT CGTCGAGACC TTCGACGAGA CCGAGGGCAC CGACTCCGCG
CTCATCGGCC TCGAGAACGC CGACCAGCTC GCGGACTCGG ACCTGATCTT CACCTTCTAC
TCCGACGCGG CCGCCCGTGC CGAGACCGAG GCCCAGCCGC TCTACCAGGC CATCCCCGCC
ATCGGGCGCG GGTCGGTCGT GGCGCCGACC GACCAGCCCT TCGTCACCGG GTCCTCGATC
ATCAACCCGC TCACGGTCCC CTGGGCCCTC GAGCGCTTCG TCCCGATGAT CGACGAGGCG
ATCGGGAAGG TCGACCAGTA G
 
Protein sequence
MLALPSSRRP VLAAALVAGA VVLAGCGSSD SSAETTPSAA PADGAFPVTV ESALGDAVID 
EAPERVVTLG MGSAETAIAL GVTPVGIEEY PWGSDDTGYL PWIHEALEES GEDLPAQFTG
GTEIDIEAIL ELEPDVILAP WSGITQEQFD TLSEIAPTVA YPDLAWSIDW DQQITTIGKA
LGQPDEAQEL ITGIEEQFTE AAAAHPEYAD VTFSYVYTTE PGSLGVFLPD EQRVAMVRGL
GLTVDPVVET FDETEGTDSA LIGLENADQL ADSDLIFTFY SDAAARAETE AQPLYQAIPA
IGRGSVVAPT DQPFVTGSSI INPLTVPWAL ERFVPMIDEA IGKVDQ