Gene Sked_15930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_15930 
Symbol 
ID8633229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1781958 
End bp1783022 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314362 
Protein GI269794907 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.456228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.327791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGTC GCCCCCACCT GCTGCTCGCC ACCTCCGTGA CACTGGCTCT CGGGCTGCTC 
GCTGGCTGCT CCTCGGACGA CGGCGACACC ACCGCGACCT CTGCGCCTGC CACGACGGAC
GCGACGACCG ACGCGCCCTC CGGGGAGACG AGCGCCCCGG CGGCCGGCGA CGGCGATCCC
GCGGCGACGG CTGCGGCGAC GTGGCTGCAG TCGCAGGCGG CGTCCGGCAC GGTCTTCCAG
ACGGAGTTCG ACGGTGTCGC GTACGACGAC TACGGCCTGA CCGGCGACGT CGTGCTCGCG
CTGCTGGCAG CCGACCAGGA CGACGCGGCG CAGCAGTACG CGACCGCGCT GACCACGGAC
GAGGCCGTCG CCGCCTATGT CGGCGACGGG ACCACGGCGC AGTACGCGGG CGCGACCGGC
AAGCTGCTCG CCGTCGTCGA CGCGGCCGAC CTGCCGACCA CCAGCATCGG CGGACGCGAC
CTCGTCGCCG AGCTGCTCGC TCTCCAGACG GACGAGGGCC GGTTCTCCGA CCTCGGCGCC
GACGACTACT CGCAGACCAT CTCGCAGTCG TGGGCCGTCG CTGCGCTGGC CACCCAGGAC
GCCGCACCGC AGGCGGCCGT CGACTACCTC GCGGCGCAGC AGTGCGAGGG GTCGGGCTTC
CCCGCCCAGC TGTCGAGCAC CGCGCCCGCC GACTGCACGC CCGACGTGGA CGCGACCGCC
TTCGCGGTGT CCGCCCTCGT CGTCGCGGGG ACCGACGACG ACGCGCCGGT CGTCGTGCAG
GCCCTCGCCT GGCTCGACTC GGTCGGTGCC ACGGACGACG CCGGTACCTC GTGGGCCTCG
GCCGACAGCG ACGGGCCGAG CATCAACAGC ACCGCGGTGG CCGTCTCCGC GCTCGAGGAC
GGCGACGCCG ACGCGAGCGC CGCGATCTCA TGGCTCGTGG CCCAGCAGGT CACGGAGGGC
GACGACGCCG GAGCGTTCCT CCTCGCGGAC GAGCCGGACG TGCGCACCAC CGCCCAGGCC
GCCGTCGCCC TCGCGGGCGA GGGCCTCGAC GACCTGCTCG GCTAG
 
Protein sequence
MNRRPHLLLA TSVTLALGLL AGCSSDDGDT TATSAPATTD ATTDAPSGET SAPAAGDGDP 
AATAAATWLQ SQAASGTVFQ TEFDGVAYDD YGLTGDVVLA LLAADQDDAA QQYATALTTD
EAVAAYVGDG TTAQYAGATG KLLAVVDAAD LPTTSIGGRD LVAELLALQT DEGRFSDLGA
DDYSQTISQS WAVAALATQD AAPQAAVDYL AAQQCEGSGF PAQLSSTAPA DCTPDVDATA
FAVSALVVAG TDDDAPVVVQ ALAWLDSVGA TDDAGTSWAS ADSDGPSINS TAVAVSALED
GDADASAAIS WLVAQQVTEG DDAGAFLLAD EPDVRTTAQA AVALAGEGLD DLLG