Gene Sked_14820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_14820 
Symbol 
ID8633118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1662604 
End bp1663935 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314252 
Protein GI269794797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00902064 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGGTTCG GCGTCAACTA CACACCCCGC GTGGGCTGGT TCCACGCCTG GCTCGACCAC 
GACCGCGACG CCGTCCGCCG CGACCTCGAG CAGGTCGCCG CCCTCGACCT CGACCACGTC
CGCATCTTCC CGCTCTGGGA CCTCGTCCAG CCCAACCGCG GGCACATCCG CCCCGCCGCT
CTCGCAGCGG TCGCCGACGT GGTCGACGCC GCCGCCGAGG TCGGGCTCGA CGTCAACGTC
GACGCCCTCC AGGGGCACCT GTCCAGCTTC GACTACCTGC CCGCCTGGCT GACCACCTGG
CACGAGCGCA ACATGTTCAC CGACCCCGAC GCGCTCGCGG GGGAGGAGGC GTACCTGCGG
GCGCTCGGCG AGACGCTGCG CGGACGCCCG AACCTCATGG GCCTGACCCT CGGCAACGAG
GTGAACCAGT TCGCCGCCCG GCCGCACCCA CGGCCGCACG AGATCGACGC CGACCAGGCC
GAGGCCTGGC TCCGCCGGCT CCTCGGCGCC GCCCGCGAAG GTTTGCTCGG CACCGAGGGA
GCAGGTGCCG AGACACCAGG TACCGCCGAC GTCCTCGTCA CGCACGCCGC CTACGACGCC
ACCTGGTACG ACGAGCGCCA GCCGTTCCTC CCGCGCCACG CCGCCGAGCT CGGCGACCAG
ACCGTCGTGC ACTCGTGGGT GTTCAACGGC GCCGCCCAGC GCCACGGCGG GCTCGGCACC
GGGTCGGTGC GGCACGCCGA GTACCTCGTG CAGCTCGCCG CCGCGTGGCA CACGGACGCG
CGCCGTCCGG TCTGGCTCCA GGAGGTCGGC GTGCCGACCA CCGTCGTCGA CCCCGACGAC
GCGGTGGCCT TCCTCGAGCA GACGGTCCGG CACGCGGCGG GCGTCGCAGG CCTCTCGGGC
ATCACCTGGT GGTGCTCGCA CGACGTCTCC CGCACGATGC TCGACTTCCC GCCGGTCGAG
TACGACCTCG GGCTCGTCGA CGAGCACGGC ACGGTGAAGC CCACCGGCCG CGCCCTCGCC
GCCCTGGCCC GCGAGCTGCG CGACGCGCCG ACGCCCGCAC CGTCACCGGT CGGCCTCGTG
CTCGACGACA CCGTGCCCCA CCGCACCGGC TGCGCACCCG GCGGCGACTT CTTCGAGGCC
TGGGTCCACG CGGCCGAGCG CGACGGACGC GGCCCCCAGG TGGTCCTGCA GTCCCGCAGC
CACGAGGCTG GGGTCCTGGC CGAGCGCGGG ATCGAACGCC TGGAGCACCC CGGAGACGTC
GACGAGACAC CCGGCCACCT CGTGCCGACG GCAGTCGCCA GCGGGGGAGC AGCGGCCACG
ATGCACCGGT AG
 
Protein sequence
MRFGVNYTPR VGWFHAWLDH DRDAVRRDLE QVAALDLDHV RIFPLWDLVQ PNRGHIRPAA 
LAAVADVVDA AAEVGLDVNV DALQGHLSSF DYLPAWLTTW HERNMFTDPD ALAGEEAYLR
ALGETLRGRP NLMGLTLGNE VNQFAARPHP RPHEIDADQA EAWLRRLLGA AREGLLGTEG
AGAETPGTAD VLVTHAAYDA TWYDERQPFL PRHAAELGDQ TVVHSWVFNG AAQRHGGLGT
GSVRHAEYLV QLAAAWHTDA RRPVWLQEVG VPTTVVDPDD AVAFLEQTVR HAAGVAGLSG
ITWWCSHDVS RTMLDFPPVE YDLGLVDEHG TVKPTGRALA ALARELRDAP TPAPSPVGLV
LDDTVPHRTG CAPGGDFFEA WVHAAERDGR GPQVVLQSRS HEAGVLAERG IERLEHPGDV
DETPGHLVPT AVASGGAAAT MHR