Gene Sked_13860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13860 
Symbol 
ID8633022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1561291 
End bp1562529 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content69% 
IMG OID 
Productmaltose-binding periplasmic protein 
Protein accessionYP_003314160 
Protein GI269794705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGAA GCATCCTTCT TGCCGGAGCG CTGGTCACCA GCCTCACCCT CGCTGCCTGC 
GGCTCGAGCG ACGACGACAC CCCCGCGGAG GGGACCGCGA CGTCGGCGGC CGGCGCTGAC
GCGGCCGGCT CCATCACGAT GTGGGTCGAC GAGGTCCGCA TCAACGACTT CCGCGGCGTC
GCGGAGACCT TCACCGCCGA CACCGGCGTC GAGGTCAACA TGGTCCAGAA GGCCTCGGGC
GACATCGGCC CGGACTTCGT CCAGCAGGCC CAGACCGGTG AGGGCCCCGA CGTCATCATC
ACCGCCTCGG ACGGCCTCGG TGAGCTCGTC ACCAACGGCC TCGTCGCACC CGTCGCCCTC
GGCGACGCGT CCTCCGACTT CGTGGCCTCG GCCGCGAGCG CCTTCGTCTA CGACGGCCAG
AACTACGGCG TGCCGTACTC GATCGAGAAC ATCGCGCTCG TCCGCAACAA CGCTCTCGCG
ACCGAGACCC CGGAGACCTT CCAGGAGCTC GTCGAGCAGG GCAAGGGCCT CGGCACCTAC
CCGATCCTCA TCCAGCAGGG CATCGAGGGC GACCCGTACC ACATGTACCC GATCCAGACG
TCCTTCGGGG CGACGGTCTT CGAGCAGACC GAGGACGGGT CGTACACGGA CCAGATCGCC
ATGGGCGGCG AGGCCGGGGA GAACTTCGCG ACGTTCCTGC GCGAGATGGG CGACGAGCGC
ATCTTCGACG CCTCGATCGA CGGCGACATC GCCAAGCAGG CCTTCATCGA CGGCGAGAGC
GCCTACACGA TCACGGGCCC GTGGAACACG ACGGCGTTCA CCGATGCCGG CATGGACATC
ACCGTCCTGC CGATCCCGAG CGCCGGTGGC GAGCCTGCTC GTCCCTTCGT CGGTGTGCAG
GGTGCGCTCG TCAACGCGTA CGCCAAGAAC CCGGTCCTCG CGAACGAGTT CGTCGCCAAC
TACCTGACGA CCGAAGAGGC GCAGGACGCG CTGTACGAGG CCGGCGGCCG CTCGCCCGCG
CTCACCGCGT CGGCCGAGAA GGTCGAGGAC CCGATCCTCG CCGGCTTCGG CGAGGCCGGT
GCCGAGGGCT TCCCGATGCC GTCCATCCCC GCCATGGCGT CGGTCTGGAC CTTCTGGGGC
GTCGGACAGG CTGAGGTCTT CACCGGTGCT GCCAGCGACC CCGTCGCCGG CTGGAACACG
ATGATCTCCA ACATCGAGTC GGCCATCGCC GGTTCCTGA
 
Protein sequence
MRRSILLAGA LVTSLTLAAC GSSDDDTPAE GTATSAAGAD AAGSITMWVD EVRINDFRGV 
AETFTADTGV EVNMVQKASG DIGPDFVQQA QTGEGPDVII TASDGLGELV TNGLVAPVAL
GDASSDFVAS AASAFVYDGQ NYGVPYSIEN IALVRNNALA TETPETFQEL VEQGKGLGTY
PILIQQGIEG DPYHMYPIQT SFGATVFEQT EDGSYTDQIA MGGEAGENFA TFLREMGDER
IFDASIDGDI AKQAFIDGES AYTITGPWNT TAFTDAGMDI TVLPIPSAGG EPARPFVGVQ
GALVNAYAKN PVLANEFVAN YLTTEEAQDA LYEAGGRSPA LTASAEKVED PILAGFGEAG
AEGFPMPSIP AMASVWTFWG VGQAEVFTGA ASDPVAGWNT MISNIESAIA GS