Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_13740 |
Symbol | |
ID | 8633010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 1547356 |
End bp | 1548861 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | arabinose efflux permease family protein |
Protein accession | YP_003314148 |
Protein GI | 269794693 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.138936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTATCGC CCACGAGCCC TCGGCAGCGA TGGCTGCTCC TCGTGACCGT GAGCGCAGGA CTGCTGCTCA TCACCCTCGA CAACTCGATC CTCTACACCG CGCTGCCCAC CCTCACCGAG GAGATCGGCG CGTCGCCGTC GCAGGGCCTG TGGATCATCA ACGCCTACCC CCTCGTCATG GCAGGCCTGC TGCTCGGAGC AGGGACCCTC GGCGACCGTG TCGGGCACCA GCGCATGTTC CTCGTCGGGC TGGTCATCTT CGCGGCGGCC TCCCTGGTCG CGGCATTCGC ACCCGCCCCC GAGGTCCTCA TCGCCGCACG CGCCGTGCTG GCGGTCGGTG CGGCGTCGAT GATGCCGGCC ACGCTCGCGC TGATCCGCAT CGCGTTCACG ATCGAGCGCG AGCGCAACGT CGCCATCGCC GTATGGGGAT CCGTCGCGCT GATCGGCAGC GCCCTGGGAC CGATCGTCGG AGGAGCCCTC CTCGAGCACT TCTGGTGGGG CTCGGTGTTC CTCGTCAACG TCCCCGTCGC GGTCATCGCG TTGCTCGTCG TGCTCAAGGT CGCCCCGCAC AACGACCCCG ACCCCTCGAA GACGTGGGAC CTGCTGTCTT CCGTCCAGGT GATGGTCGCG ATGGTCGGGC TCGTCTTCGC CCTCAAGGAG GTCACCAAGC CCGGTCCGTC GTGGCCCGTG GTCGCGGCAG CCCTCGTGGC CGCAGCACTC GGAGCGATCA CCTTCACCCG TCGCCAGTCA CGCCTGGACC ACCCCCTGCT CGACTTCTCG ATCTTCCGGA ACCGCGCCTT CGCCGCCGGT GTCCTCGCGG CAGCGTTTGC GATGTTCGCC GTGGGCGGCA TCCAGCTCGT CACCAGCCAG CGCTACCAGC TGGTCGAAGG CCTCAGCCCG CTCGAGGCCG GCGCGCTGGT CGCGGCCGTG GCGGTCGGCG CCCTGCCCAC CGGGCTGCTC GGCGGTGCGT TCTTGCACGT GGTCGGGCTC AGGACCCTCA TCGGCGGCGG GCTGACCGTC AGCACCGTCG GGGTGGTCGT GACCGTCACC AGCTTCCAGT CGGGCCTGGG CTGGATGATC GCCGGTCTCG CGCTGACCGG CATGGGGCTC GGCGCGGCGA TGTCCGTCGC CTCGACCGCG ATCGTCGGCA ACGTGCCGCC GCGCCGCGCC GGCATGGCCT CGTCGCTCGA AGAGGTCTCC TACGAGTTCG GCAGCCTCAC CGCGGTCGCG ATCCTCGGTT CGCTGCTCAC CGCGATCTAC ACCAGCACCA TCACCCTGCC GCCCGGAGCG CTGGCCGAGG CCGGAGACTC CCTCTCCGGG GCGCTGTCCA CGAGCGCCTC GGACCCTGGC ATCCTAGAGG CGGCCTTCAC GGCGTTCGAC CACGGGTACT CCGTCGTCAT GGTCGTCGTG GCGGCAGTCC TGGCGACCGG GGCGGCCCTG ACCACCGCGC TGCTCTGGCG CTACGGTCCG GGGAGCGCCT CCTCGTCCTA CGACTCCGAC CACTGA
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Protein sequence | MVSPTSPRQR WLLLVTVSAG LLLITLDNSI LYTALPTLTE EIGASPSQGL WIINAYPLVM AGLLLGAGTL GDRVGHQRMF LVGLVIFAAA SLVAAFAPAP EVLIAARAVL AVGAASMMPA TLALIRIAFT IERERNVAIA VWGSVALIGS ALGPIVGGAL LEHFWWGSVF LVNVPVAVIA LLVVLKVAPH NDPDPSKTWD LLSSVQVMVA MVGLVFALKE VTKPGPSWPV VAAALVAAAL GAITFTRRQS RLDHPLLDFS IFRNRAFAAG VLAAAFAMFA VGGIQLVTSQ RYQLVEGLSP LEAGALVAAV AVGALPTGLL GGAFLHVVGL RTLIGGGLTV STVGVVVTVT SFQSGLGWMI AGLALTGMGL GAAMSVASTA IVGNVPPRRA GMASSLEEVS YEFGSLTAVA ILGSLLTAIY TSTITLPPGA LAEAGDSLSG ALSTSASDPG ILEAAFTAFD HGYSVVMVVV AAVLATGAAL TTALLWRYGP GSASSSYDSD H
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