Gene Sked_13160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13160 
Symbol 
ID8632952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1479896 
End bp1480357 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content73% 
IMG OID 
ProductPyridoxamine 5'-phosphate oxidase 
Protein accessionYP_003314090 
Protein GI269794635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0760402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.982249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAA CCGTCGCGCG CGCCGAGCGC GCCACCCGCG AGCAGCTGCT CGACTTCGTC 
CGTCCGCGCC ACCGCGCGAT ACTCACCACC TACAAGAAGG ACGGCTCGCT GCAGACGTCG
CCGGTCGCCT GCGGCCTCGA CGCCGAGGGC CGGGTCGTGG TGTCGACCTA CCCGGAGCGC
GCGAAGGCGG CCAACGCCCG CCGCGACGCC CGCGTCACCC TCTGCATCCT GTCCGACGAC
TGGGACGGCC CGTACGTGCA GGTCGACGGG ACCGCCGAGG TGCTCGACAT GCCCGCGGCC
CTGGAGCCGC TCGTCGAGTA CTTCCGGGTG ATCGCCGGGG AGCACCCGGA CTGGGACGAG
TACCGCGACG CGATGCGCGC GCAGGACAAG TCGCTCATCC GGGTGACCAT CACCTCGTGG
GGCCCGCTCG CCTCGGGCGG CTTCCCGGCG CGGCTCGCAT GA
 
Protein sequence
MARTVARAER ATREQLLDFV RPRHRAILTT YKKDGSLQTS PVACGLDAEG RVVVSTYPER 
AKAANARRDA RVTLCILSDD WDGPYVQVDG TAEVLDMPAA LEPLVEYFRV IAGEHPDWDE
YRDAMRAQDK SLIRVTITSW GPLASGGFPA RLA