Gene Sked_12620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12620 
Symbol 
ID8632898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1432789 
End bp1433817 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content70% 
IMG OID 
Productadenosine deaminase 
Protein accessionYP_003314038 
Protein GI269794583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.341302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACTGC CAGCCTCACC CACCCGCGAC TTCGTCACCG GCCTGCCCAA GGCCGAGCTC 
CACCTGCACC TCGAGGGCAC CCTCGAGCCC GACCTCAAGC TCGAGCTCGC GCGCCGCAAC
GGCGTGGAGC TCGCCCAGAG CACCGTCGAG GAGGTCCAGG CCAGCTACGT GTTCGACTCG
CTCGCCAGCT TCCTCGCCGT GTACTACCCG GCGATGGACG TGCTCGTCAC GGAGCAGGAC
TTCTACGACC TCGCGACCGC CTACCTGCGC CGCGCCGCGG CGGACGGCGT CACGCACGTC
GAGATGTTCT TCGACCCGCA GGCGCACACC ACCCGCGGCG TGCCCTTCGC CGACGTCGTC
AACGGCTACC ACCGCGCGGC TGTCGACGGT GCCGCGCTCG GCGTCGACGC GCACCTCATC
CTGTGCTTCC TGCGGGACCT CTCCGCCGAG AGCGCCGCCG AGACCCTCGA GGCCTCCGTG
CCCTTCGCGG ACAAGATCCT GGGTGTCGGA CTCGACTCCG ACGAGCGCGA GAACCCGCCG
GCCAAGTTCG CGGCGGTCTT CGCCCGTGCC CGCGACCTCG GCTACCGCCT CACCATGCAC
TGCGACATCG ACCAGGTCGG CAGCATCGAG AACATCCGTC AGGTCCTCGA GGACATCGGC
GTCGACCGCA TCGACCACGG CACCAACGTC GTCGAGGACC CGGCGCTCGT CGAGCTCGTG
CGCGAGCGTG GCCTCGGCCT CACGTGCTGC CCGGTGTCCA ACTCCTTCGT CACCGACGAC
ATGAAGGCCA CCGAGATCGC CCAGCTGCTC CGGGCGGGCG TCAAGGTCAC GGTGAGCTCG
GACGACCCCG CGTACTTCGG CGGGTACGTG GCAGACAACT ACGTCGCCCT CGTCGAGAAG
GCCGGCCTGA CGACCGCCGA GGTCGTCACC CTCGCCAAGA ACTCCTTCGA GGCGTCCTGG
GTGTCCGACG CAGACCGCGC CCGGTTCCTC GCCGAGGTCG ACGCGTACGT CGAGCGCTAC
GCGGGCTGA
 
Protein sequence
MALPASPTRD FVTGLPKAEL HLHLEGTLEP DLKLELARRN GVELAQSTVE EVQASYVFDS 
LASFLAVYYP AMDVLVTEQD FYDLATAYLR RAAADGVTHV EMFFDPQAHT TRGVPFADVV
NGYHRAAVDG AALGVDAHLI LCFLRDLSAE SAAETLEASV PFADKILGVG LDSDERENPP
AKFAAVFARA RDLGYRLTMH CDIDQVGSIE NIRQVLEDIG VDRIDHGTNV VEDPALVELV
RERGLGLTCC PVSNSFVTDD MKATEIAQLL RAGVKVTVSS DDPAYFGGYV ADNYVALVEK
AGLTTAEVVT LAKNSFEASW VSDADRARFL AEVDAYVERY AG